Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX6P35712 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SOX6P35712 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX6P35712 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SOX6P35712 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX6P35712 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX6P35712 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SOX6P35712 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.36■□□□□ 0.53
SOX6P35712 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.36■□□□□ 0.53
SOX6P35712 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.36■□□□□ 0.53
SOX6P35712 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SOX6P35712 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SOX6P35712 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.36■□□□□ 0.53
SOX6P35712 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.36■□□□□ 0.53
SOX6P35712 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.36■□□□□ 0.53
SOX6P35712 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.36■□□□□ 0.53
SOX6P35712 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SOX6P35712 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX6P35712 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX6P35712 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.36■□□□□ 0.53
SOX6P35712 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX6P35712 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 AC004408.2-201ENST00000623613 2777 ntBASIC18.35■□□□□ 0.53
SOX6P35712 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SOX6P35712 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.35■□□□□ 0.53
SOX6P35712 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.35■□□□□ 0.53
SOX6P35712 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.35■□□□□ 0.53
SOX6P35712 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SOX6P35712 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX6P35712 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SOX6P35712 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX6P35712 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SOX6P35712 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX6P35712 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX6P35712 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX6P35712 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX6P35712 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SOX6P35712 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SOX6P35712 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SOX6P35712 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SOX6P35712 AC239859.2-201ENST00000444165 318 ntBASIC18.34■□□□□ 0.53
SOX6P35712 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.34■□□□□ 0.53
SOX6P35712 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SOX6P35712 AL499627.2-201ENST00000606283 725 ntBASIC18.34■□□□□ 0.53
SOX6P35712 MIR6722-201ENST00000617286 78 ntBASIC18.34■□□□□ 0.53
SOX6P35712 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX6P35712 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SOX6P35712 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SOX6P35712 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SOX6P35712 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX6P35712 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
SOX6P35712 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX6P35712 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SOX6P35712 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SOX6P35712 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SOX6P35712 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SOX6P35712 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SOX6P35712 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SOX6P35712 AC020763.4-201ENST00000623414 4170 ntBASIC18.33■□□□□ 0.53
SOX6P35712 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SOX6P35712 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.33■□□□□ 0.53
SOX6P35712 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.33■□□□□ 0.53
SOX6P35712 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.33■□□□□ 0.53
SOX6P35712 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.33■□□□□ 0.53
SOX6P35712 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SOX6P35712 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SOX6P35712 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SOX6P35712 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SOX6P35712 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SOX6P35712 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SOX6P35712 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SOX6P35712 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.33■□□□□ 0.52
SOX6P35712 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.33■□□□□ 0.52
SOX6P35712 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SOX6P35712 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SOX6P35712 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.33■□□□□ 0.52
SOX6P35712 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SOX6P35712 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
SOX6P35712 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SOX6P35712 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SOX6P35712 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.32■□□□□ 0.52
SOX6P35712 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX6P35712 AC120498.9-201ENST00000339021 3867 ntBASIC18.32■□□□□ 0.52
SOX6P35712 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.32■□□□□ 0.52
SOX6P35712 AC021242.3-201ENST00000607598 1377 ntBASIC18.32■□□□□ 0.52
SOX6P35712 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX6P35712 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms