Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLCN1P35523 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
CLCN1P35523 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLCN1P35523 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLCN1P35523 AC007613.1-201ENST00000572811 2597 ntBASIC23.27■■□□□ 1.32
CLCN1P35523 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC23.27■■□□□ 1.32
CLCN1P35523 AC020916.1-201ENST00000587762 1774 ntBASIC23.27■■□□□ 1.32
CLCN1P35523 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.27■■□□□ 1.32
CLCN1P35523 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CLCN1P35523 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC23.26■■□□□ 1.31
CLCN1P35523 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 AC099778.1-201ENST00000568593 1911 ntBASIC23.26■■□□□ 1.31
CLCN1P35523 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
CLCN1P35523 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CLCN1P35523 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.26■■□□□ 1.31
CLCN1P35523 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CLCN1P35523 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CLCN1P35523 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.26■■□□□ 1.31
CLCN1P35523 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.26■■□□□ 1.31
CLCN1P35523 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.26■■□□□ 1.31
CLCN1P35523 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
CLCN1P35523 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN1P35523 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
CLCN1P35523 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
CLCN1P35523 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN1P35523 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CLCN1P35523 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN1P35523 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CLCN1P35523 UNC93B3-201ENST00000308076 687 ntBASIC23.25■■□□□ 1.31
CLCN1P35523 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN1P35523 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN1P35523 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.25■■□□□ 1.31
CLCN1P35523 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN1P35523 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN1P35523 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.25■■□□□ 1.31
CLCN1P35523 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.25■■□□□ 1.31
CLCN1P35523 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN1P35523 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.24■■□□□ 1.31
CLCN1P35523 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN1P35523 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN1P35523 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN1P35523 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN1P35523 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CLCN1P35523 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
CLCN1P35523 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN1P35523 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN1P35523 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.24■■□□□ 1.31
CLCN1P35523 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN1P35523 AC093503.3-201ENST00000624917 2352 ntBASIC23.24■■□□□ 1.31
CLCN1P35523 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CLCN1P35523 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN1P35523 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN1P35523 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN1P35523 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.24■■□□□ 1.31
CLCN1P35523 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN1P35523 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CLCN1P35523 AL512408.1-201ENST00000569378 2000 ntBASIC23.23■■□□□ 1.31
CLCN1P35523 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC23.23■■□□□ 1.31
CLCN1P35523 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.23■■□□□ 1.31
CLCN1P35523 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.23■■□□□ 1.31
CLCN1P35523 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 SLC47A1P1-202ENST00000449666 945 ntBASIC23.23■■□□□ 1.31
CLCN1P35523 AC079089.2-201ENST00000531211 1277 ntBASIC23.23■■□□□ 1.31
CLCN1P35523 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CLCN1P35523 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.23■■□□□ 1.31
CLCN1P35523 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN1P35523 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CLCN1P35523 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLCN1P35523 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCN1P35523 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.22■■□□□ 1.31
CLCN1P35523 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.22■■□□□ 1.31
CLCN1P35523 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.22■■□□□ 1.31
CLCN1P35523 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLCN1P35523 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms