Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC005229.4-201ENST00000610085 2198 ntBASIC21.13■□□□□ 0.97
SLC6A4P31645 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SLC6A4P31645 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A4P31645 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SLC6A4P31645 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A4P31645 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A4P31645 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A4P31645 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A4P31645 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.13■□□□□ 0.97
SLC6A4P31645 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC6A4P31645 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SLC6A4P31645 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A4P31645 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A4P31645 AC007375.3-201ENST00000600936 2314 ntBASIC21.13■□□□□ 0.97
SLC6A4P31645 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC6A4P31645 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC6A4P31645 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC6A4P31645 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SLC6A4P31645 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A4P31645 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC6A4P31645 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A4P31645 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A4P31645 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A4P31645 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A4P31645 AC105020.6-201ENST00000621523 1217 ntBASIC21.12■□□□□ 0.97
SLC6A4P31645 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A4P31645 PLK5-205ENST00000642079 1969 ntBASIC21.12■□□□□ 0.97
SLC6A4P31645 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A4P31645 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A4P31645 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC6A4P31645 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SLC6A4P31645 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC6A4P31645 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A4P31645 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A4P31645 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A4P31645 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SLC6A4P31645 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC6A4P31645 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A4P31645 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.11■□□□□ 0.97
SLC6A4P31645 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A4P31645 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A4P31645 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A4P31645 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A4P31645 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A4P31645 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC6A4P31645 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A4P31645 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A4P31645 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.1■□□□□ 0.97
SLC6A4P31645 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A4P31645 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.1■□□□□ 0.97
SLC6A4P31645 MIR4651-201ENST00000582622 73 ntBASIC21.1■□□□□ 0.97
SLC6A4P31645 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SLC6A4P31645 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A4P31645 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A4P31645 AC027702.1-201ENST00000563810 1770 ntBASIC21.1■□□□□ 0.97
SLC6A4P31645 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SLC6A4P31645 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.09■□□□□ 0.97
SLC6A4P31645 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A4P31645 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A4P31645 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A4P31645 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.09■□□□□ 0.97
SLC6A4P31645 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.09■□□□□ 0.97
SLC6A4P31645 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC6A4P31645 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A4P31645 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SLC6A4P31645 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A4P31645 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
SLC6A4P31645 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC6A4P31645 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SLC6A4P31645 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A4P31645 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC6A4P31645 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC6A4P31645 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC6A4P31645 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC6A4P31645 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC6A4P31645 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC6A4P31645 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLC6A4P31645 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLC6A4P31645 RNA5SP413-201ENST00000516373 109 ntBASIC21.08■□□□□ 0.97
SLC6A4P31645 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.08■□□□□ 0.97
SLC6A4P31645 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC6A4P31645 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC6A4P31645 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.08■□□□□ 0.97
SLC6A4P31645 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.08■□□□□ 0.96
SLC6A4P31645 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.08■□□□□ 0.96
SLC6A4P31645 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC6A4P31645 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A4P31645 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SLC6A4P31645 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A4P31645 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC6A4P31645 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A4P31645 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A4P31645 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.07■□□□□ 0.96
SLC6A4P31645 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.07■□□□□ 0.96
SLC6A4P31645 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A4P31645 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC6A4P31645 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC6A4P31645 AL356652.1-201ENST00000615962 565 ntBASIC21.07■□□□□ 0.96
SLC6A4P31645 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC6A4P31645 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms