Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN6P29350 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN6P29350 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPN6P29350 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN6P29350 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN6P29350 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN6P29350 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN6P29350 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.47■□□□□ 0.71
PTPN6P29350 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.47■□□□□ 0.71
PTPN6P29350 AL121603.2-201ENST00000557373 2117 ntBASIC19.47■□□□□ 0.71
PTPN6P29350 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPN6P29350 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN6P29350 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN6P29350 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPN6P29350 AC004854.2-201ENST00000608450 1441 ntBASIC19.47■□□□□ 0.71
PTPN6P29350 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPN6P29350 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
PTPN6P29350 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN6P29350 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN6P29350 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN6P29350 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN6P29350 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN6P29350 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN6P29350 AFG3L1P-217ENST00000557444 2447 ntBASIC19.46■□□□□ 0.71
PTPN6P29350 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN6P29350 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN6P29350 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN6P29350 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.46■□□□□ 0.71
PTPN6P29350 AC022517.1-201ENST00000592429 346 ntBASIC19.46■□□□□ 0.71
PTPN6P29350 RARRES2P11-201ENST00000635158 484 ntBASIC19.46■□□□□ 0.71
PTPN6P29350 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN6P29350 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN6P29350 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN6P29350 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN6P29350 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN6P29350 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN6P29350 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN6P29350 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN6P29350 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPN6P29350 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN6P29350 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN6P29350 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN6P29350 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.45■□□□□ 0.7
PTPN6P29350 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN6P29350 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN6P29350 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN6P29350 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPN6P29350 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN6P29350 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN6P29350 AC112907.3-201ENST00000577781 2400 ntBASIC19.45■□□□□ 0.7
PTPN6P29350 PCDHAC2-203ENST00000615316 3011 ntBASIC19.45■□□□□ 0.7
PTPN6P29350 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN6P29350 AC099778.1-201ENST00000568593 1911 ntBASIC19.45■□□□□ 0.7
PTPN6P29350 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN6P29350 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN6P29350 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN6P29350 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN6P29350 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTPN6P29350 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN6P29350 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN6P29350 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN6P29350 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN6P29350 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN6P29350 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTPN6P29350 KRT87P-202ENST00000534226 1464 ntBASIC19.44■□□□□ 0.7
PTPN6P29350 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN6P29350 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN6P29350 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.44■□□□□ 0.7
PTPN6P29350 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PTPN6P29350 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN6P29350 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN6P29350 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
PTPN6P29350 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN6P29350 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN6P29350 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN6P29350 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN6P29350 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN6P29350 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN6P29350 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN6P29350 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTPN6P29350 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PTPN6P29350 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN6P29350 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN6P29350 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
PTPN6P29350 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTPN6P29350 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN6P29350 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.43■□□□□ 0.7
PTPN6P29350 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.43■□□□□ 0.7
PTPN6P29350 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.43■□□□□ 0.7
PTPN6P29350 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.43■□□□□ 0.7
PTPN6P29350 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN6P29350 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN6P29350 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN6P29350 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN6P29350 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN6P29350 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN6P29350 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN6P29350 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPN6P29350 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN6P29350 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms