Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NFKB1P19838 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.88■□□□□ 0.93
NFKB1P19838 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.88■□□□□ 0.93
NFKB1P19838 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NFKB1P19838 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NFKB1P19838 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
NFKB1P19838 LINC01521-201ENST00000504184 1943 ntBASIC20.88■□□□□ 0.93
NFKB1P19838 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NFKB1P19838 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NFKB1P19838 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NFKB1P19838 AL121603.2-201ENST00000557373 2117 ntBASIC20.87■□□□□ 0.93
NFKB1P19838 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.87■□□□□ 0.93
NFKB1P19838 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NFKB1P19838 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.87■□□□□ 0.93
NFKB1P19838 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.87■□□□□ 0.93
NFKB1P19838 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
NFKB1P19838 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NFKB1P19838 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NFKB1P19838 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NFKB1P19838 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NFKB1P19838 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.87■□□□□ 0.93
NFKB1P19838 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NFKB1P19838 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NFKB1P19838 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NFKB1P19838 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NFKB1P19838 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NFKB1P19838 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NFKB1P19838 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NFKB1P19838 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.87■□□□□ 0.93
NFKB1P19838 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NFKB1P19838 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.86■□□□□ 0.93
NFKB1P19838 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NFKB1P19838 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NFKB1P19838 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NFKB1P19838 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NFKB1P19838 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
NFKB1P19838 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NFKB1P19838 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NFKB1P19838 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NFKB1P19838 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NFKB1P19838 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NFKB1P19838 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NFKB1P19838 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.86■□□□□ 0.93
NFKB1P19838 AC011767.1-201ENST00000617410 1153 ntBASIC20.86■□□□□ 0.93
NFKB1P19838 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
NFKB1P19838 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.86■□□□□ 0.93
NFKB1P19838 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.86■□□□□ 0.93
NFKB1P19838 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.86■□□□□ 0.93
NFKB1P19838 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.86■□□□□ 0.93
NFKB1P19838 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NFKB1P19838 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.86■□□□□ 0.93
NFKB1P19838 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.86■□□□□ 0.93
NFKB1P19838 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.86■□□□□ 0.93
NFKB1P19838 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NFKB1P19838 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NFKB1P19838 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NFKB1P19838 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NFKB1P19838 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NFKB1P19838 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NFKB1P19838 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NFKB1P19838 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NFKB1P19838 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.85■□□□□ 0.93
NFKB1P19838 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NFKB1P19838 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
NFKB1P19838 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NFKB1P19838 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NFKB1P19838 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NFKB1P19838 CDV3P1-201ENST00000471403 739 ntBASIC20.85■□□□□ 0.93
NFKB1P19838 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.85■□□□□ 0.93
NFKB1P19838 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.85■□□□□ 0.93
NFKB1P19838 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
NFKB1P19838 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NFKB1P19838 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NFKB1P19838 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NFKB1P19838 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
NFKB1P19838 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.85■□□□□ 0.93
NFKB1P19838 GABARAPL3-202ENST00000624044 1851 ntBASIC20.85■□□□□ 0.93
NFKB1P19838 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NFKB1P19838 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NFKB1P19838 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NFKB1P19838 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NFKB1P19838 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NFKB1P19838 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NFKB1P19838 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NFKB1P19838 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NFKB1P19838 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NFKB1P19838 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NFKB1P19838 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NFKB1P19838 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
NFKB1P19838 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.84■□□□□ 0.93
NFKB1P19838 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.84■□□□□ 0.93
NFKB1P19838 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.84■□□□□ 0.93
NFKB1P19838 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.84■□□□□ 0.93
NFKB1P19838 AC022517.1-201ENST00000592429 346 ntBASIC20.84■□□□□ 0.93
NFKB1P19838 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.84■□□□□ 0.93
NFKB1P19838 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NFKB1P19838 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NFKB1P19838 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NFKB1P19838 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
NFKB1P19838 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms