Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC090192.1-201ENST00000517740 490 ntBASIC20.58■□□□□ 0.89
VCLP18206 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.58■□□□□ 0.89
VCLP18206 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VCLP18206 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
VCLP18206 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VCLP18206 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VCLP18206 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VCLP18206 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.58■□□□□ 0.88
VCLP18206 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
VCLP18206 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
VCLP18206 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCLP18206 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
VCLP18206 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VCLP18206 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCLP18206 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
VCLP18206 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCLP18206 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.57■□□□□ 0.88
VCLP18206 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCLP18206 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCLP18206 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.57■□□□□ 0.88
VCLP18206 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCLP18206 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VCLP18206 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.57■□□□□ 0.88
VCLP18206 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VCLP18206 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.57■□□□□ 0.88
VCLP18206 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VCLP18206 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.57■□□□□ 0.88
VCLP18206 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VCLP18206 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.56■□□□□ 0.88
VCLP18206 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCLP18206 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.56■□□□□ 0.88
VCLP18206 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCLP18206 AC007322.1-201ENST00000426983 750 ntBASIC20.56■□□□□ 0.88
VCLP18206 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.56■□□□□ 0.88
VCLP18206 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.56■□□□□ 0.88
VCLP18206 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.56■□□□□ 0.88
VCLP18206 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.56■□□□□ 0.88
VCLP18206 AC013268.1-206ENST00000638368 961 ntBASIC20.56■□□□□ 0.88
VCLP18206 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.56■□□□□ 0.88
VCLP18206 AC112229.1-201ENST00000639295 961 ntBASIC20.56■□□□□ 0.88
VCLP18206 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCLP18206 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCLP18206 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCLP18206 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCLP18206 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCLP18206 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCLP18206 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VCLP18206 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.55■□□□□ 0.88
VCLP18206 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCLP18206 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCLP18206 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.55■□□□□ 0.88
VCLP18206 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.55■□□□□ 0.88
VCLP18206 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.55■□□□□ 0.88
VCLP18206 CDCA4P2-201ENST00000441182 718 ntBASIC20.55■□□□□ 0.88
VCLP18206 TERF1P5-201ENST00000477545 1207 ntBASIC20.55■□□□□ 0.88
VCLP18206 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.55■□□□□ 0.88
VCLP18206 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
VCLP18206 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
VCLP18206 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VCLP18206 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
VCLP18206 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCLP18206 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VCLP18206 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
VCLP18206 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.54■□□□□ 0.88
VCLP18206 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
VCLP18206 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.54■□□□□ 0.88
VCLP18206 AC245052.3-201ENST00000450182 901 ntBASIC20.54■□□□□ 0.88
VCLP18206 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.54■□□□□ 0.88
VCLP18206 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.54■□□□□ 0.88
VCLP18206 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 DUX4L16-201ENST00000555130 1264 ntBASIC20.54■□□□□ 0.88
VCLP18206 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.54■□□□□ 0.88
VCLP18206 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.54■□□□□ 0.88
VCLP18206 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 AL049796.1-201ENST00000565336 1766 ntBASIC20.54■□□□□ 0.88
VCLP18206 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
VCLP18206 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VCLP18206 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VCLP18206 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.53■□□□□ 0.88
VCLP18206 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VCLP18206 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.53■□□□□ 0.88
VCLP18206 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VCLP18206 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VCLP18206 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
VCLP18206 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VCLP18206 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VCLP18206 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VCLP18206 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms