Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTPS1P17812 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTPS1P17812 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTPS1P17812 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTPS1P17812 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.64■□□□□ 0.89
CTPS1P17812 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.63■□□□□ 0.89
CTPS1P17812 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS1P17812 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS1P17812 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS1P17812 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.63■□□□□ 0.89
CTPS1P17812 AC010980.2-201ENST00000587099 1412 ntBASIC20.63■□□□□ 0.89
CTPS1P17812 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS1P17812 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS1P17812 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.63■□□□□ 0.89
CTPS1P17812 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.63■□□□□ 0.89
CTPS1P17812 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS1P17812 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS1P17812 ID1-201ENST00000376105 1233 ntBASIC20.63■□□□□ 0.89
CTPS1P17812 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.63■□□□□ 0.89
CTPS1P17812 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.63■□□□□ 0.89
CTPS1P17812 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTPS1P17812 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.63■□□□□ 0.89
CTPS1P17812 MKRN4P-201ENST00000444706 1521 ntBASIC20.63■□□□□ 0.89
CTPS1P17812 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CTPS1P17812 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS1P17812 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CTPS1P17812 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CTPS1P17812 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CTPS1P17812 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS1P17812 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS1P17812 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS1P17812 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS1P17812 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS1P17812 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS1P17812 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CTPS1P17812 GUSBP6-202ENST00000438529 1198 ntBASIC20.62■□□□□ 0.89
CTPS1P17812 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.62■□□□□ 0.89
CTPS1P17812 AC104771.1-201ENST00000603335 964 ntBASIC20.62■□□□□ 0.89
CTPS1P17812 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS1P17812 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS1P17812 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CTPS1P17812 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.62■□□□□ 0.89
CTPS1P17812 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CTPS1P17812 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTPS1P17812 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.61■□□□□ 0.89
CTPS1P17812 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS1P17812 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS1P17812 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.61■□□□□ 0.89
CTPS1P17812 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS1P17812 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS1P17812 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS1P17812 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS1P17812 TSPY6P-201ENST00000448518 926 ntBASIC20.61■□□□□ 0.89
CTPS1P17812 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.61■□□□□ 0.89
CTPS1P17812 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.61■□□□□ 0.89
CTPS1P17812 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.61■□□□□ 0.89
CTPS1P17812 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CTPS1P17812 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.61■□□□□ 0.89
CTPS1P17812 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS1P17812 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.61■□□□□ 0.89
CTPS1P17812 AC006128.1-201ENST00000624704 1661 ntBASIC20.61■□□□□ 0.89
CTPS1P17812 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CTPS1P17812 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTPS1P17812 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.61■□□□□ 0.89
CTPS1P17812 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS1P17812 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CTPS1P17812 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS1P17812 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CTPS1P17812 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CTPS1P17812 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS1P17812 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS1P17812 SLC29A4P1-201ENST00000398760 971 ntBASIC20.6■□□□□ 0.89
CTPS1P17812 AL512625.2-201ENST00000417533 625 ntBASIC20.6■□□□□ 0.89
CTPS1P17812 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CTPS1P17812 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.6■□□□□ 0.89
CTPS1P17812 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CTPS1P17812 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.6■□□□□ 0.89
CTPS1P17812 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.6■□□□□ 0.89
CTPS1P17812 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.6■□□□□ 0.89
CTPS1P17812 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS1P17812 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CTPS1P17812 CYP21A1P-202ENST00000354927 1481 ntBASIC20.6■□□□□ 0.89
CTPS1P17812 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS1P17812 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS1P17812 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CTPS1P17812 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS1P17812 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTPS1P17812 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.6■□□□□ 0.89
CTPS1P17812 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.59■□□□□ 0.89
CTPS1P17812 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.59■□□□□ 0.89
CTPS1P17812 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.59■□□□□ 0.89
CTPS1P17812 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.59■□□□□ 0.89
CTPS1P17812 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS1P17812 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.59■□□□□ 0.89
CTPS1P17812 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.59■□□□□ 0.89
CTPS1P17812 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTPS1P17812 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.59■□□□□ 0.89
CTPS1P17812 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.59■□□□□ 0.89
CTPS1P17812 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.59■□□□□ 0.89
CTPS1P17812 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms