Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC130P13994 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC130P13994 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC130P13994 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC130P13994 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC130P13994 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC130P13994 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC130P13994 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC130P13994 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC130P13994 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC130P13994 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC130P13994 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC130P13994 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC130P13994 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC130P13994 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.75■■□□□ 1.07
CCDC130P13994 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC130P13994 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC130P13994 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC130P13994 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC130P13994 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC130P13994 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC130P13994 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.75■■□□□ 1.07
CCDC130P13994 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC130P13994 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.75■■□□□ 1.07
CCDC130P13994 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC130P13994 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC130P13994 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC130P13994 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC130P13994 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC130P13994 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC130P13994 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC130P13994 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC130P13994 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC130P13994 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC130P13994 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC130P13994 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC130P13994 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC130P13994 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC130P13994 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC130P13994 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC130P13994 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC130P13994 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC130P13994 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC130P13994 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC130P13994 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC130P13994 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC130P13994 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC130P13994 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.73■■□□□ 1.07
CCDC130P13994 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC130P13994 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC130P13994 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC130P13994 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC130P13994 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC130P13994 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC130P13994 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC130P13994 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC130P13994 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC130P13994 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCDC130P13994 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC130P13994 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC130P13994 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC130P13994 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC130P13994 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC130P13994 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC130P13994 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC130P13994 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC130P13994 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC130P13994 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC130P13994 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC130P13994 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CCDC130P13994 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC130P13994 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
CCDC130P13994 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC130P13994 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC130P13994 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC130P13994 AC027702.1-201ENST00000563810 1770 ntBASIC21.71■■□□□ 1.07
CCDC130P13994 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC130P13994 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC130P13994 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC130P13994 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
CCDC130P13994 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC130P13994 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC130P13994 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
CCDC130P13994 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CCDC130P13994 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC130P13994 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC130P13994 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC130P13994 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC130P13994 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC130P13994 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC130P13994 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC130P13994 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
CCDC130P13994 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC130P13994 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC130P13994 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC130P13994 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CCDC130P13994 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC130P13994 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC130P13994 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC130P13994 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms