Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HLA-DOBP13765 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.39■□□□□ 0.53
HLA-DOBP13765 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HLA-DOBP13765 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DOBP13765 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DOBP13765 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DOBP13765 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.39■□□□□ 0.53
HLA-DOBP13765 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DOBP13765 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.39■□□□□ 0.53
HLA-DOBP13765 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DOBP13765 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HLA-DOBP13765 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.39■□□□□ 0.53
HLA-DOBP13765 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.39■□□□□ 0.53
HLA-DOBP13765 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.39■□□□□ 0.53
HLA-DOBP13765 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DOBP13765 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
HLA-DOBP13765 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DOBP13765 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HLA-DOBP13765 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DOBP13765 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.39■□□□□ 0.53
HLA-DOBP13765 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DOBP13765 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DOBP13765 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DOBP13765 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HLA-DOBP13765 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DOBP13765 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.38■□□□□ 0.53
HLA-DOBP13765 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HLA-DOBP13765 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DOBP13765 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DOBP13765 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DOBP13765 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DOBP13765 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.38■□□□□ 0.53
HLA-DOBP13765 AC006015.1-201ENST00000429970 570 ntBASIC18.38■□□□□ 0.53
HLA-DOBP13765 KRT18P11-201ENST00000435214 1283 ntBASIC18.38■□□□□ 0.53
HLA-DOBP13765 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
HLA-DOBP13765 TERF1P5-201ENST00000477545 1207 ntBASIC18.38■□□□□ 0.53
HLA-DOBP13765 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
HLA-DOBP13765 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.38■□□□□ 0.53
HLA-DOBP13765 MFSD11-216ENST00000590393 1141 ntBASIC18.38■□□□□ 0.53
HLA-DOBP13765 AC022517.1-201ENST00000592429 346 ntBASIC18.38■□□□□ 0.53
HLA-DOBP13765 AC011767.1-201ENST00000617410 1153 ntBASIC18.38■□□□□ 0.53
HLA-DOBP13765 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DOBP13765 AL121603.2-201ENST00000557373 2117 ntBASIC18.38■□□□□ 0.53
HLA-DOBP13765 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
HLA-DOBP13765 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
HLA-DOBP13765 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HLA-DOBP13765 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DOBP13765 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-DOBP13765 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DOBP13765 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DOBP13765 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DOBP13765 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DOBP13765 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DOBP13765 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DOBP13765 AC027702.1-201ENST00000563810 1770 ntBASIC18.37■□□□□ 0.53
HLA-DOBP13765 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DOBP13765 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DOBP13765 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.37■□□□□ 0.53
HLA-DOBP13765 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DOBP13765 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HLA-DOBP13765 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DOBP13765 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DOBP13765 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DOBP13765 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DOBP13765 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DOBP13765 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HLA-DOBP13765 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DOBP13765 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.36■□□□□ 0.53
HLA-DOBP13765 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HLA-DOBP13765 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DOBP13765 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-DOBP13765 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DOBP13765 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HLA-DOBP13765 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DOBP13765 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HLA-DOBP13765 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DOBP13765 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HLA-DOBP13765 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DOBP13765 AP005212.1-201ENST00000581547 1997 ntBASIC18.35■□□□□ 0.53
HLA-DOBP13765 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
HLA-DOBP13765 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DOBP13765 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HLA-DOBP13765 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DOBP13765 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DOBP13765 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DOBP13765 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.35■□□□□ 0.53
HLA-DOBP13765 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms