Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.6■□□□□ 0.73
BCKDHAP12694 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHAP12694 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHAP12694 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHAP12694 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHAP12694 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
BCKDHAP12694 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHAP12694 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHAP12694 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
BCKDHAP12694 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHAP12694 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHAP12694 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHAP12694 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.59■□□□□ 0.73
BCKDHAP12694 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHAP12694 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.59■□□□□ 0.73
BCKDHAP12694 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHAP12694 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.59■□□□□ 0.73
BCKDHAP12694 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHAP12694 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHAP12694 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.59■□□□□ 0.73
BCKDHAP12694 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.59■□□□□ 0.73
BCKDHAP12694 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.59■□□□□ 0.73
BCKDHAP12694 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHAP12694 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHAP12694 YBX1P1-201ENST00000445822 960 ntBASIC19.59■□□□□ 0.73
BCKDHAP12694 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.59■□□□□ 0.73
BCKDHAP12694 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.59■□□□□ 0.73
BCKDHAP12694 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.59■□□□□ 0.73
BCKDHAP12694 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.59■□□□□ 0.73
BCKDHAP12694 AC116050.2-201ENST00000612102 1779 ntBASIC19.59■□□□□ 0.73
BCKDHAP12694 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.59■□□□□ 0.73
BCKDHAP12694 AC092720.2-201ENST00000602388 1665 ntBASIC19.59■□□□□ 0.73
BCKDHAP12694 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHAP12694 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
BCKDHAP12694 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BCKDHAP12694 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BCKDHAP12694 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.58■□□□□ 0.73
BCKDHAP12694 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.58■□□□□ 0.73
BCKDHAP12694 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
BCKDHAP12694 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.58■□□□□ 0.73
BCKDHAP12694 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BCKDHAP12694 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BCKDHAP12694 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
BCKDHAP12694 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.58■□□□□ 0.72
BCKDHAP12694 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.58■□□□□ 0.72
BCKDHAP12694 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.58■□□□□ 0.72
BCKDHAP12694 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.58■□□□□ 0.72
BCKDHAP12694 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.58■□□□□ 0.72
BCKDHAP12694 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.58■□□□□ 0.72
BCKDHAP12694 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.58■□□□□ 0.72
BCKDHAP12694 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.58■□□□□ 0.72
BCKDHAP12694 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.58■□□□□ 0.72
BCKDHAP12694 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.58■□□□□ 0.72
BCKDHAP12694 AC112907.3-201ENST00000577781 2400 ntBASIC19.58■□□□□ 0.72
BCKDHAP12694 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BCKDHAP12694 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.58■□□□□ 0.72
BCKDHAP12694 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
BCKDHAP12694 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
BCKDHAP12694 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.58■□□□□ 0.72
BCKDHAP12694 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BCKDHAP12694 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BCKDHAP12694 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
BCKDHAP12694 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BCKDHAP12694 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.57■□□□□ 0.72
BCKDHAP12694 AC099778.1-201ENST00000568593 1911 ntBASIC19.57■□□□□ 0.72
BCKDHAP12694 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BCKDHAP12694 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.57■□□□□ 0.72
BCKDHAP12694 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.57■□□□□ 0.72
BCKDHAP12694 CCDC92B-201ENST00000575506 885 ntBASIC19.57■□□□□ 0.72
BCKDHAP12694 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.57■□□□□ 0.72
BCKDHAP12694 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.57■□□□□ 0.72
BCKDHAP12694 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BCKDHAP12694 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.57■□□□□ 0.72
BCKDHAP12694 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BCKDHAP12694 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
BCKDHAP12694 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
BCKDHAP12694 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
BCKDHAP12694 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.57■□□□□ 0.72
BCKDHAP12694 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BCKDHAP12694 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BCKDHAP12694 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BCKDHAP12694 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.57■□□□□ 0.72
BCKDHAP12694 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.57■□□□□ 0.72
BCKDHAP12694 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.57■□□□□ 0.72
BCKDHAP12694 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BCKDHAP12694 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BCKDHAP12694 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
BCKDHAP12694 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
BCKDHAP12694 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BCKDHAP12694 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.56■□□□□ 0.72
BCKDHAP12694 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BCKDHAP12694 KRT18P20-201ENST00000548986 1279 ntBASIC19.56■□□□□ 0.72
BCKDHAP12694 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.56■□□□□ 0.72
BCKDHAP12694 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.56■□□□□ 0.72
BCKDHAP12694 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BCKDHAP12694 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BCKDHAP12694 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.56■□□□□ 0.72
BCKDHAP12694 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BCKDHAP12694 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BCKDHAP12694 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms