Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.74■□□□□ 0.59
BMP4P12644 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BMP4P12644 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.74■□□□□ 0.59
BMP4P12644 MIR6084-201ENST00000622012 110 ntBASIC18.74■□□□□ 0.59
BMP4P12644 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BMP4P12644 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BMP4P12644 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
BMP4P12644 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BMP4P12644 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BMP4P12644 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BMP4P12644 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
BMP4P12644 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BMP4P12644 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BMP4P12644 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BMP4P12644 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.73■□□□□ 0.59
BMP4P12644 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.73■□□□□ 0.59
BMP4P12644 AC004687.1-201ENST00000579003 1625 ntBASIC18.73■□□□□ 0.59
BMP4P12644 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
BMP4P12644 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
BMP4P12644 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BMP4P12644 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
BMP4P12644 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BMP4P12644 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
BMP4P12644 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.73■□□□□ 0.59
BMP4P12644 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BMP4P12644 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
BMP4P12644 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
BMP4P12644 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.72■□□□□ 0.59
BMP4P12644 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.72■□□□□ 0.59
BMP4P12644 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.72■□□□□ 0.59
BMP4P12644 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
BMP4P12644 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
BMP4P12644 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.72■□□□□ 0.59
BMP4P12644 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.72■□□□□ 0.59
BMP4P12644 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.72■□□□□ 0.59
BMP4P12644 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.72■□□□□ 0.59
BMP4P12644 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.72■□□□□ 0.59
BMP4P12644 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.72■□□□□ 0.59
BMP4P12644 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.72■□□□□ 0.59
BMP4P12644 AL137784.2-201ENST00000607332 1000 ntBASIC18.72■□□□□ 0.59
BMP4P12644 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.72■□□□□ 0.59
BMP4P12644 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.72■□□□□ 0.59
BMP4P12644 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 AC112907.3-201ENST00000577781 2400 ntBASIC18.72■□□□□ 0.59
BMP4P12644 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BMP4P12644 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BMP4P12644 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BMP4P12644 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BMP4P12644 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.71■□□□□ 0.59
BMP4P12644 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BMP4P12644 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BMP4P12644 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.71■□□□□ 0.59
BMP4P12644 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
BMP4P12644 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BMP4P12644 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BMP4P12644 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BMP4P12644 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BMP4P12644 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BMP4P12644 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.71■□□□□ 0.59
BMP4P12644 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.71■□□□□ 0.58
BMP4P12644 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
BMP4P12644 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.7■□□□□ 0.58
BMP4P12644 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP4P12644 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
BMP4P12644 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.7■□□□□ 0.58
BMP4P12644 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.7■□□□□ 0.58
BMP4P12644 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BMP4P12644 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP4P12644 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BMP4P12644 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP4P12644 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP4P12644 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.7■□□□□ 0.58
BMP4P12644 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
BMP4P12644 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BMP4P12644 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP4P12644 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.7■□□□□ 0.58
BMP4P12644 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.7■□□□□ 0.58
BMP4P12644 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
BMP4P12644 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.7■□□□□ 0.58
BMP4P12644 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP4P12644 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP4P12644 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
BMP4P12644 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BMP4P12644 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP4P12644 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BMP4P12644 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms