Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
THRAP10827 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
THRAP10827 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
THRAP10827 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.51■□□□□ 0.87
THRAP10827 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
THRAP10827 KRT18P20-201ENST00000548986 1279 ntBASIC20.51■□□□□ 0.87
THRAP10827 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
THRAP10827 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
THRAP10827 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
THRAP10827 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
THRAP10827 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
THRAP10827 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.51■□□□□ 0.87
THRAP10827 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
THRAP10827 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.51■□□□□ 0.87
THRAP10827 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
THRAP10827 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
THRAP10827 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
THRAP10827 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THRAP10827 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
THRAP10827 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THRAP10827 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THRAP10827 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
THRAP10827 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.5■□□□□ 0.87
THRAP10827 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
THRAP10827 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THRAP10827 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.5■□□□□ 0.87
THRAP10827 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.5■□□□□ 0.87
THRAP10827 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THRAP10827 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.5■□□□□ 0.87
THRAP10827 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.5■□□□□ 0.87
THRAP10827 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
THRAP10827 AC007322.1-201ENST00000426983 750 ntBASIC20.5■□□□□ 0.87
THRAP10827 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
THRAP10827 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.5■□□□□ 0.87
THRAP10827 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
THRAP10827 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.5■□□□□ 0.87
THRAP10827 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.5■□□□□ 0.87
THRAP10827 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
THRAP10827 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
THRAP10827 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
THRAP10827 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
THRAP10827 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
THRAP10827 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
THRAP10827 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THRAP10827 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
THRAP10827 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
THRAP10827 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.49■□□□□ 0.87
THRAP10827 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.49■□□□□ 0.87
THRAP10827 AC005181.1-201ENST00000604782 1256 ntBASIC20.49■□□□□ 0.87
THRAP10827 AL121832.2-201ENST00000610979 668 ntBASIC20.49■□□□□ 0.87
THRAP10827 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.49■□□□□ 0.87
THRAP10827 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THRAP10827 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
THRAP10827 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.49■□□□□ 0.87
THRAP10827 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
THRAP10827 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THRAP10827 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
THRAP10827 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
THRAP10827 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
THRAP10827 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
THRAP10827 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
THRAP10827 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 EEF1DP3-203ENST00000566025 782 ntBASIC20.48■□□□□ 0.87
THRAP10827 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
THRAP10827 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.48■□□□□ 0.87
THRAP10827 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
THRAP10827 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.48■□□□□ 0.87
THRAP10827 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
THRAP10827 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
THRAP10827 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
THRAP10827 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
THRAP10827 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
THRAP10827 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
THRAP10827 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
THRAP10827 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.47■□□□□ 0.87
THRAP10827 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
THRAP10827 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
THRAP10827 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.47■□□□□ 0.87
THRAP10827 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
THRAP10827 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
THRAP10827 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
THRAP10827 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.47■□□□□ 0.87
THRAP10827 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.47■□□□□ 0.87
THRAP10827 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
THRAP10827 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
THRAP10827 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.47■□□□□ 0.87
THRAP10827 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
THRAP10827 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms