Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.29■■□□□ 1
CD48P09326 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.29■■□□□ 1
CD48P09326 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.29■■□□□ 1
CD48P09326 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CD48P09326 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.29■■□□□ 1
CD48P09326 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD48P09326 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.29■■□□□ 1
CD48P09326 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CD48P09326 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD48P09326 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD48P09326 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CD48P09326 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CD48P09326 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.28■■□□□ 1
CD48P09326 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CD48P09326 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD48P09326 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
CD48P09326 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
CD48P09326 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.28■■□□□ 1
CD48P09326 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.28■■□□□ 1
CD48P09326 AL162430.1-201ENST00000480705 870 ntBASIC21.28■■□□□ 1
CD48P09326 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.28■■□□□ 1
CD48P09326 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.28■■□□□ 1
CD48P09326 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.28■■□□□ 1
CD48P09326 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CD48P09326 AC137761.2-201ENST00000561729 223 ntBASIC21.28■■□□□ 1
CD48P09326 AC145350.3-201ENST00000569033 163 ntBASIC21.28■■□□□ 1
CD48P09326 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CD48P09326 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
CD48P09326 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.28■■□□□ 1
CD48P09326 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.28■■□□□ 1
CD48P09326 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
CD48P09326 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.28■■□□□ 1
CD48P09326 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.28■■□□□ 1
CD48P09326 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CD48P09326 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CD48P09326 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.28■■□□□ 1
CD48P09326 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CD48P09326 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.28■■□□□ 1
CD48P09326 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.28■■□□□ 1
CD48P09326 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD48P09326 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.28■■□□□ 1
CD48P09326 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.28■■□□□ 1
CD48P09326 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.28■■□□□ 1
CD48P09326 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CD48P09326 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD48P09326 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD48P09326 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD48P09326 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CD48P09326 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD48P09326 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD48P09326 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.27■■□□□ 1
CD48P09326 AC010536.3-201ENST00000620306 533 ntBASIC21.27■■□□□ 1
CD48P09326 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD48P09326 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD48P09326 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.27■□□□□ 0.99
CD48P09326 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.26■□□□□ 0.99
CD48P09326 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.26■□□□□ 0.99
CD48P09326 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 AL512408.1-201ENST00000569378 2000 ntBASIC21.26■□□□□ 0.99
CD48P09326 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD48P09326 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CD48P09326 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.25■□□□□ 0.99
CD48P09326 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.25■□□□□ 0.99
CD48P09326 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD48P09326 AC007322.3-201ENST00000426526 701 ntBASIC21.25■□□□□ 0.99
CD48P09326 TERF1P5-201ENST00000477545 1207 ntBASIC21.25■□□□□ 0.99
CD48P09326 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.25■□□□□ 0.99
CD48P09326 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.25■□□□□ 0.99
CD48P09326 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD48P09326 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CD48P09326 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD48P09326 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CD48P09326 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CD48P09326 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD48P09326 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD48P09326 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD48P09326 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CD48P09326 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.24■□□□□ 0.99
CD48P09326 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.24■□□□□ 0.99
CD48P09326 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.24■□□□□ 0.99
CD48P09326 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CD48P09326 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.24■□□□□ 0.99
CD48P09326 MFSD11-216ENST00000590393 1141 ntBASIC21.24■□□□□ 0.99
CD48P09326 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CD48P09326 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CD48P09326 MIR2861-201ENST00000636310 90 ntBASIC21.24■□□□□ 0.99
CD48P09326 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CD48P09326 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms