Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRPRAP08240 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRPRAP08240 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRPRAP08240 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.78■□□□□ 0.92
SRPRAP08240 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRPRAP08240 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SRPRAP08240 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.78■□□□□ 0.92
SRPRAP08240 ESRRAP1-201ENST00000400596 1257 ntBASIC20.78■□□□□ 0.92
SRPRAP08240 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.78■□□□□ 0.92
SRPRAP08240 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.78■□□□□ 0.92
SRPRAP08240 AL356652.1-201ENST00000615962 565 ntBASIC20.78■□□□□ 0.92
SRPRAP08240 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.78■□□□□ 0.92
SRPRAP08240 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRPRAP08240 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
SRPRAP08240 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.78■□□□□ 0.92
SRPRAP08240 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SRPRAP08240 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SRPRAP08240 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRPRAP08240 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SRPRAP08240 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SRPRAP08240 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.77■□□□□ 0.92
SRPRAP08240 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRPRAP08240 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.77■□□□□ 0.92
SRPRAP08240 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRPRAP08240 C2orf69P4-201ENST00000565394 541 ntBASIC20.77■□□□□ 0.92
SRPRAP08240 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRPRAP08240 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRPRAP08240 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRPRAP08240 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SRPRAP08240 AL049796.1-201ENST00000565336 1766 ntBASIC20.77■□□□□ 0.91
SRPRAP08240 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPRAP08240 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPRAP08240 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SRPRAP08240 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPRAP08240 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.76■□□□□ 0.91
SRPRAP08240 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRPRAP08240 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SRPRAP08240 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPRAP08240 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPRAP08240 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.76■□□□□ 0.91
SRPRAP08240 KRT18P29-201ENST00000397031 1267 ntBASIC20.76■□□□□ 0.91
SRPRAP08240 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPRAP08240 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.76■□□□□ 0.91
SRPRAP08240 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.76■□□□□ 0.91
SRPRAP08240 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRPRAP08240 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRPRAP08240 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRPRAP08240 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPRAP08240 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPRAP08240 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SRPRAP08240 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.75■□□□□ 0.91
SRPRAP08240 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SRPRAP08240 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SRPRAP08240 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.75■□□□□ 0.91
SRPRAP08240 AC026366.1-201ENST00000488803 879 ntBASIC20.75■□□□□ 0.91
SRPRAP08240 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SRPRAP08240 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.75■□□□□ 0.91
SRPRAP08240 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPRAP08240 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.75■□□□□ 0.91
SRPRAP08240 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.74■□□□□ 0.91
SRPRAP08240 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPRAP08240 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPRAP08240 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.74■□□□□ 0.91
SRPRAP08240 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPRAP08240 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPRAP08240 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.74■□□□□ 0.91
SRPRAP08240 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRPRAP08240 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRPRAP08240 PNMA6B-201ENST00000538162 1200 ntBASIC20.74■□□□□ 0.91
SRPRAP08240 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRPRAP08240 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SRPRAP08240 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRPRAP08240 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRPRAP08240 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SRPRAP08240 AL024507.2-201ENST00000606070 2574 ntBASIC20.74■□□□□ 0.91
SRPRAP08240 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPRAP08240 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRPRAP08240 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPRAP08240 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.73■□□□□ 0.91
SRPRAP08240 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.73■□□□□ 0.91
SRPRAP08240 AC092368.3-202ENST00000574180 1591 ntBASIC20.73■□□□□ 0.91
SRPRAP08240 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRPRAP08240 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms