Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN1P07384 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN1P07384 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
CAPN1P07384 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CAPN1P07384 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CAPN1P07384 AC061975.6-201ENST00000579045 1553 ntBASIC20.14■□□□□ 0.81
CAPN1P07384 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN1P07384 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN1P07384 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN1P07384 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.14■□□□□ 0.81
CAPN1P07384 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN1P07384 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN1P07384 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN1P07384 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN1P07384 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.14■□□□□ 0.81
CAPN1P07384 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN1P07384 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.14■□□□□ 0.81
CAPN1P07384 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN1P07384 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CAPN1P07384 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.14■□□□□ 0.81
CAPN1P07384 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.13■□□□□ 0.81
CAPN1P07384 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.13■□□□□ 0.81
CAPN1P07384 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.13■□□□□ 0.81
CAPN1P07384 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
CAPN1P07384 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CAPN1P07384 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.13■□□□□ 0.81
CAPN1P07384 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.13■□□□□ 0.81
CAPN1P07384 NCF1B-203ENST00000435988 1254 ntBASIC20.13■□□□□ 0.81
CAPN1P07384 DUX4L16-201ENST00000555130 1264 ntBASIC20.13■□□□□ 0.81
CAPN1P07384 AC104771.1-201ENST00000603335 964 ntBASIC20.13■□□□□ 0.81
CAPN1P07384 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.13■□□□□ 0.81
CAPN1P07384 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CAPN1P07384 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CAPN1P07384 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 AC092667.1-201ENST00000434301 2586 ntBASIC20.13■□□□□ 0.81
CAPN1P07384 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.13■□□□□ 0.81
CAPN1P07384 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CAPN1P07384 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN1P07384 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN1P07384 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN1P07384 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.12■□□□□ 0.81
CAPN1P07384 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
CAPN1P07384 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN1P07384 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN1P07384 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.12■□□□□ 0.81
CAPN1P07384 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.12■□□□□ 0.81
CAPN1P07384 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CAPN1P07384 AC006970.2-201ENST00000450065 779 ntBASIC20.12■□□□□ 0.81
CAPN1P07384 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.12■□□□□ 0.81
CAPN1P07384 AC138907.5-202ENST00000569484 235 ntBASIC20.12■□□□□ 0.81
CAPN1P07384 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.12■□□□□ 0.81
CAPN1P07384 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.12■□□□□ 0.81
CAPN1P07384 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.12■□□□□ 0.81
CAPN1P07384 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN1P07384 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN1P07384 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN1P07384 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN1P07384 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN1P07384 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN1P07384 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN1P07384 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CAPN1P07384 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN1P07384 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN1P07384 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN1P07384 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN1P07384 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN1P07384 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN1P07384 AC010141.2-201ENST00000452426 721 ntBASIC20.11■□□□□ 0.81
CAPN1P07384 MYCNOS-205ENST00000641950 531 ntBASIC20.11■□□□□ 0.81
CAPN1P07384 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN1P07384 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CAPN1P07384 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CAPN1P07384 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CAPN1P07384 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.1■□□□□ 0.81
CAPN1P07384 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN1P07384 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CAPN1P07384 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CAPN1P07384 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN1P07384 MIR663A-201ENST00000385250 93 ntBASIC20.1■□□□□ 0.81
CAPN1P07384 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN1P07384 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CAPN1P07384 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.1■□□□□ 0.81
CAPN1P07384 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN1P07384 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CAPN1P07384 AL121603.2-201ENST00000557373 2117 ntBASIC20.1■□□□□ 0.81
CAPN1P07384 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.1■□□□□ 0.81
CAPN1P07384 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms