Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CAPNS1P04632 AC004687.1-201ENST00000579003 1625 ntBASIC20.38■□□□□ 0.85
CAPNS1P04632 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CAPNS1P04632 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CAPNS1P04632 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPNS1P04632 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPNS1P04632 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
CAPNS1P04632 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CAPNS1P04632 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPNS1P04632 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.37■□□□□ 0.85
CAPNS1P04632 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.37■□□□□ 0.85
CAPNS1P04632 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPNS1P04632 UNC93B5-201ENST00000530315 699 ntBASIC20.37■□□□□ 0.85
CAPNS1P04632 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.37■□□□□ 0.85
CAPNS1P04632 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.37■□□□□ 0.85
CAPNS1P04632 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.37■□□□□ 0.85
CAPNS1P04632 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPNS1P04632 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.37■□□□□ 0.85
CAPNS1P04632 AL359736.2-201ENST00000621992 437 ntBASIC20.37■□□□□ 0.85
CAPNS1P04632 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPNS1P04632 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CAPNS1P04632 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPNS1P04632 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPNS1P04632 LINC01006-201ENST00000333319 2292 ntBASIC20.36■□□□□ 0.85
CAPNS1P04632 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPNS1P04632 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CAPNS1P04632 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CAPNS1P04632 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPNS1P04632 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.36■□□□□ 0.85
CAPNS1P04632 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.36■□□□□ 0.85
CAPNS1P04632 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.36■□□□□ 0.85
CAPNS1P04632 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.36■□□□□ 0.85
CAPNS1P04632 AC016405.3-201ENST00000607710 860 ntBASIC20.36■□□□□ 0.85
CAPNS1P04632 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.36■□□□□ 0.85
CAPNS1P04632 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.36■□□□□ 0.85
CAPNS1P04632 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CAPNS1P04632 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CAPNS1P04632 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPNS1P04632 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPNS1P04632 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPNS1P04632 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CAPNS1P04632 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.35■□□□□ 0.85
CAPNS1P04632 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CAPNS1P04632 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CAPNS1P04632 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.35■□□□□ 0.85
CAPNS1P04632 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CAPNS1P04632 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CAPNS1P04632 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.35■□□□□ 0.85
CAPNS1P04632 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.35■□□□□ 0.85
CAPNS1P04632 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.35■□□□□ 0.85
CAPNS1P04632 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.35■□□□□ 0.85
CAPNS1P04632 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.35■□□□□ 0.85
CAPNS1P04632 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.35■□□□□ 0.85
CAPNS1P04632 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.35■□□□□ 0.85
CAPNS1P04632 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.35■□□□□ 0.85
CAPNS1P04632 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPNS1P04632 AC055733.4-201ENST00000638462 1354 ntBASIC20.34■□□□□ 0.85
CAPNS1P04632 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CAPNS1P04632 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.34■□□□□ 0.85
CAPNS1P04632 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.34■□□□□ 0.85
CAPNS1P04632 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CAPNS1P04632 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPNS1P04632 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPNS1P04632 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPNS1P04632 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.34■□□□□ 0.85
CAPNS1P04632 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPNS1P04632 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.34■□□□□ 0.85
CAPNS1P04632 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.34■□□□□ 0.85
CAPNS1P04632 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.34■□□□□ 0.85
CAPNS1P04632 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPNS1P04632 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CAPNS1P04632 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.34■□□□□ 0.85
CAPNS1P04632 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPNS1P04632 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.34■□□□□ 0.85
CAPNS1P04632 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPNS1P04632 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPNS1P04632 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.34■□□□□ 0.85
CAPNS1P04632 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPNS1P04632 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CAPNS1P04632 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.33■□□□□ 0.85
CAPNS1P04632 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.33■□□□□ 0.85
CAPNS1P04632 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CAPNS1P04632 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CAPNS1P04632 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms