Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
P04436 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04436 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
P04436 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04436 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
P04436 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04436 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
P04436 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.77■□□□□ 0.6
P04436 RNA5SP413-201ENST00000516373 109 ntBASIC18.77■□□□□ 0.6
P04436 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.77■□□□□ 0.6
P04436 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.77■□□□□ 0.6
P04436 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
P04436 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
P04436 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.77■□□□□ 0.6
P04436 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.77■□□□□ 0.59
P04436 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
P04436 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.77■□□□□ 0.59
P04436 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
P04436 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04436 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
P04436 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
P04436 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
P04436 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.76■□□□□ 0.59
P04436 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04436 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.76■□□□□ 0.59
P04436 AL024507.2-201ENST00000606070 2574 ntBASIC18.76■□□□□ 0.59
P04436 AC011484.1-201ENST00000377652 1995 ntBASIC18.76■□□□□ 0.59
P04436 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04436 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04436 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.76■□□□□ 0.59
P04436 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
P04436 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.76■□□□□ 0.59
P04436 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.76■□□□□ 0.59
P04436 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.76■□□□□ 0.59
P04436 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04436 MYC-209ENST00000641252 345 ntBASIC18.76■□□□□ 0.59
P04436 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
P04436 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
P04436 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
P04436 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
P04436 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04436 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
P04436 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04436 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04436 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04436 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
P04436 LINC00565-201ENST00000562710 2331 ntBASIC18.75■□□□□ 0.59
P04436 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P04436 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04436 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
P04436 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04436 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.75■□□□□ 0.59
P04436 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
P04436 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.75■□□□□ 0.59
P04436 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.75■□□□□ 0.59
P04436 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04436 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
P04436 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.75■□□□□ 0.59
P04436 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04436 AL049796.1-201ENST00000565336 1766 ntBASIC18.75■□□□□ 0.59
P04436 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04436 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
P04436 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
P04436 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
P04436 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
P04436 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
P04436 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.74■□□□□ 0.59
P04436 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.74■□□□□ 0.59
P04436 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.74■□□□□ 0.59
P04436 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.74■□□□□ 0.59
P04436 AC083880.1-201ENST00000608266 535 ntBASIC18.74■□□□□ 0.59
P04436 AC105020.6-201ENST00000621523 1217 ntBASIC18.74■□□□□ 0.59
P04436 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04436 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
P04436 AC087633.2-202ENST00000565166 1439 ntBASIC18.74■□□□□ 0.59
P04436 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
P04436 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.73■□□□□ 0.59
P04436 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P04436 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
P04436 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.73■□□□□ 0.59
P04436 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P04436 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
P04436 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.73■□□□□ 0.59
P04436 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.73■□□□□ 0.59
P04436 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.73■□□□□ 0.59
P04436 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P04436 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms