Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.09■■□□□ 1.13
C4BPAP04003 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.09■■□□□ 1.13
C4BPAP04003 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.09■■□□□ 1.13
C4BPAP04003 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.09■■□□□ 1.13
C4BPAP04003 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.09■■□□□ 1.13
C4BPAP04003 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.09■■□□□ 1.13
C4BPAP04003 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
C4BPAP04003 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
C4BPAP04003 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
C4BPAP04003 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
C4BPAP04003 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
C4BPAP04003 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
C4BPAP04003 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
C4BPAP04003 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
C4BPAP04003 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.08■■□□□ 1.13
C4BPAP04003 MCRIP2P1-201ENST00000394346 511 ntBASIC22.08■■□□□ 1.13
C4BPAP04003 NCF1B-203ENST00000435988 1254 ntBASIC22.08■■□□□ 1.13
C4BPAP04003 AC006970.2-201ENST00000450065 779 ntBASIC22.08■■□□□ 1.13
C4BPAP04003 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.08■■□□□ 1.13
C4BPAP04003 AF201337.1-201ENST00000520239 748 ntBASIC22.08■■□□□ 1.13
C4BPAP04003 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.08■■□□□ 1.13
C4BPAP04003 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.08■■□□□ 1.13
C4BPAP04003 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
C4BPAP04003 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
C4BPAP04003 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
C4BPAP04003 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
C4BPAP04003 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.08■■□□□ 1.12
C4BPAP04003 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
C4BPAP04003 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
C4BPAP04003 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
C4BPAP04003 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
C4BPAP04003 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
C4BPAP04003 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
C4BPAP04003 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
C4BPAP04003 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
C4BPAP04003 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
C4BPAP04003 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.07■■□□□ 1.12
C4BPAP04003 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.07■■□□□ 1.12
C4BPAP04003 AC083906.2-201ENST00000511578 360 ntBASIC22.07■■□□□ 1.12
C4BPAP04003 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.07■■□□□ 1.12
C4BPAP04003 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
C4BPAP04003 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.07■■□□□ 1.12
C4BPAP04003 AC105036.2-201ENST00000569468 176 ntBASIC22.07■■□□□ 1.12
C4BPAP04003 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.07■■□□□ 1.12
C4BPAP04003 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.07■■□□□ 1.12
C4BPAP04003 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.07■■□□□ 1.12
C4BPAP04003 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
C4BPAP04003 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
C4BPAP04003 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
C4BPAP04003 AC087633.2-202ENST00000565166 1439 ntBASIC22.06■■□□□ 1.12
C4BPAP04003 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
C4BPAP04003 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
C4BPAP04003 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
C4BPAP04003 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
C4BPAP04003 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.06■■□□□ 1.12
C4BPAP04003 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
C4BPAP04003 AL355472.2-201ENST00000422958 438 ntBASIC22.06■■□□□ 1.12
C4BPAP04003 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
C4BPAP04003 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
C4BPAP04003 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.06■■□□□ 1.12
C4BPAP04003 AL121832.2-201ENST00000610979 668 ntBASIC22.06■■□□□ 1.12
C4BPAP04003 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.06■■□□□ 1.12
C4BPAP04003 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
C4BPAP04003 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.06■■□□□ 1.12
C4BPAP04003 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
C4BPAP04003 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
C4BPAP04003 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
C4BPAP04003 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
C4BPAP04003 KRT8P36-201ENST00000489121 1440 ntBASIC22.06■■□□□ 1.12
C4BPAP04003 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
C4BPAP04003 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.05■■□□□ 1.12
C4BPAP04003 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.05■■□□□ 1.12
C4BPAP04003 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
C4BPAP04003 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
C4BPAP04003 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
C4BPAP04003 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
C4BPAP04003 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
C4BPAP04003 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
C4BPAP04003 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
C4BPAP04003 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
C4BPAP04003 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.05■■□□□ 1.12
C4BPAP04003 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.05■■□□□ 1.12
C4BPAP04003 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.05■■□□□ 1.12
C4BPAP04003 CYP2T3P-201ENST00000601990 817 ntBASIC22.05■■□□□ 1.12
C4BPAP04003 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
C4BPAP04003 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
C4BPAP04003 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
C4BPAP04003 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
C4BPAP04003 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
C4BPAP04003 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
C4BPAP04003 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
C4BPAP04003 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
C4BPAP04003 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.04■■□□□ 1.12
C4BPAP04003 GUSBP6-202ENST00000438529 1198 ntBASIC22.04■■□□□ 1.12
C4BPAP04003 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.04■■□□□ 1.12
C4BPAP04003 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.04■■□□□ 1.12
C4BPAP04003 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
C4BPAP04003 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
C4BPAP04003 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.04■■□□□ 1.12
C4BPAP04003 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms