Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQB1P01920 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQB1P01920 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQB1P01920 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DQB1P01920 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DQB1P01920 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DQB1P01920 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.71■□□□□ 0.43
HLA-DQB1P01920 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 KRT16P3-201ENST00000439127 1283 ntBASIC17.71■□□□□ 0.43
HLA-DQB1P01920 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DQB1P01920 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
HLA-DQB1P01920 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
HLA-DQB1P01920 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HLA-DQB1P01920 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQB1P01920 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.69■□□□□ 0.42
HLA-DQB1P01920 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms