Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.26■□□□□ 0.19
IFNA1P01562 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
IFNA1P01562 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
IFNA1P01562 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IFNA1P01562 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IFNA1P01562 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFNA1P01562 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFNA1P01562 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.25■□□□□ 0.19
IFNA1P01562 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFNA1P01562 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.25■□□□□ 0.19
IFNA1P01562 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.25■□□□□ 0.19
IFNA1P01562 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
IFNA1P01562 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IFNA1P01562 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
IFNA1P01562 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFNA1P01562 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFNA1P01562 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFNA1P01562 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.25■□□□□ 0.19
IFNA1P01562 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IFNA1P01562 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.25■□□□□ 0.19
IFNA1P01562 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
IFNA1P01562 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
IFNA1P01562 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.24■□□□□ 0.19
IFNA1P01562 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.24■□□□□ 0.19
IFNA1P01562 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
IFNA1P01562 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.24■□□□□ 0.19
IFNA1P01562 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFNA1P01562 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
IFNA1P01562 AP000974.1-201ENST00000623909 2387 ntBASIC16.23■□□□□ 0.19
IFNA1P01562 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFNA1P01562 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IFNA1P01562 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFNA1P01562 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.23■□□□□ 0.19
IFNA1P01562 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
IFNA1P01562 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IFNA1P01562 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
IFNA1P01562 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
IFNA1P01562 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.23■□□□□ 0.19
IFNA1P01562 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFNA1P01562 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFNA1P01562 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
IFNA1P01562 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IFNA1P01562 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IFNA1P01562 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.23■□□□□ 0.19
IFNA1P01562 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.23■□□□□ 0.19
IFNA1P01562 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.23■□□□□ 0.19
IFNA1P01562 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFNA1P01562 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.23■□□□□ 0.19
IFNA1P01562 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFNA1P01562 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFNA1P01562 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFNA1P01562 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFNA1P01562 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFNA1P01562 AC003102.1-202ENST00000563394 1796 ntBASIC16.23■□□□□ 0.19
IFNA1P01562 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.23■□□□□ 0.19
IFNA1P01562 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFNA1P01562 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFNA1P01562 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.22■□□□□ 0.19
IFNA1P01562 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.22■□□□□ 0.19
IFNA1P01562 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFNA1P01562 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFNA1P01562 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.22■□□□□ 0.19
IFNA1P01562 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
IFNA1P01562 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IFNA1P01562 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IFNA1P01562 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFNA1P01562 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFNA1P01562 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.22■□□□□ 0.19
IFNA1P01562 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IFNA1P01562 AL499627.2-201ENST00000606283 725 ntBASIC16.22■□□□□ 0.19
IFNA1P01562 MIR7108-201ENST00000614319 87 ntBASIC16.22■□□□□ 0.19
IFNA1P01562 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFNA1P01562 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
IFNA1P01562 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFNA1P01562 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFNA1P01562 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFNA1P01562 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.22■□□□□ 0.19
IFNA1P01562 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFNA1P01562 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
IFNA1P01562 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms