Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.72■□□□□ 0.91
USP1O94782 AP001160.3-201ENST00000601484 763 ntBASIC20.72■□□□□ 0.91
USP1O94782 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.72■□□□□ 0.91
USP1O94782 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
USP1O94782 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP1O94782 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
USP1O94782 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP1O94782 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP1O94782 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP1O94782 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP1O94782 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP1O94782 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP1O94782 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP1O94782 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP1O94782 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.71■□□□□ 0.91
USP1O94782 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
USP1O94782 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.71■□□□□ 0.91
USP1O94782 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.71■□□□□ 0.91
USP1O94782 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.71■□□□□ 0.91
USP1O94782 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP1O94782 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP1O94782 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP1O94782 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.71■□□□□ 0.91
USP1O94782 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
USP1O94782 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
USP1O94782 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP1O94782 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP1O94782 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP1O94782 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP1O94782 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP1O94782 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.7■□□□□ 0.9
USP1O94782 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.7■□□□□ 0.9
USP1O94782 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP1O94782 KRT18P20-201ENST00000548986 1279 ntBASIC20.7■□□□□ 0.9
USP1O94782 SLC7A5P2-201ENST00000553010 536 ntBASIC20.7■□□□□ 0.9
USP1O94782 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.7■□□□□ 0.9
USP1O94782 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.7■□□□□ 0.9
USP1O94782 CCDC92B-201ENST00000575506 885 ntBASIC20.7■□□□□ 0.9
USP1O94782 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.7■□□□□ 0.9
USP1O94782 MIR6821-201ENST00000617625 74 ntBASIC20.7■□□□□ 0.9
USP1O94782 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP1O94782 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP1O94782 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.7■□□□□ 0.9
USP1O94782 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP1O94782 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP1O94782 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP1O94782 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.69■□□□□ 0.9
USP1O94782 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
USP1O94782 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.69■□□□□ 0.9
USP1O94782 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
USP1O94782 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP1O94782 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP1O94782 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.69■□□□□ 0.9
USP1O94782 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.69■□□□□ 0.9
USP1O94782 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP1O94782 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP1O94782 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP1O94782 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
USP1O94782 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP1O94782 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP1O94782 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP1O94782 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
USP1O94782 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP1O94782 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.68■□□□□ 0.9
USP1O94782 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.68■□□□□ 0.9
USP1O94782 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP1O94782 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP1O94782 AC097381.1-201ENST00000429019 1296 ntBASIC20.68■□□□□ 0.9
USP1O94782 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.68■□□□□ 0.9
USP1O94782 KRT18P14-201ENST00000534205 1250 ntBASIC20.68■□□□□ 0.9
USP1O94782 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.68■□□□□ 0.9
USP1O94782 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.68■□□□□ 0.9
USP1O94782 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.68■□□□□ 0.9
USP1O94782 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP1O94782 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.68■□□□□ 0.9
USP1O94782 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.68■□□□□ 0.9
USP1O94782 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.68■□□□□ 0.9
USP1O94782 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP1O94782 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP1O94782 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.68■□□□□ 0.9
USP1O94782 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP1O94782 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.67■□□□□ 0.9
USP1O94782 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.67■□□□□ 0.9
USP1O94782 AC116050.2-201ENST00000612102 1779 ntBASIC20.67■□□□□ 0.9
USP1O94782 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
USP1O94782 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
USP1O94782 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
USP1O94782 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP1O94782 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.67■□□□□ 0.9
USP1O94782 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP1O94782 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
USP1O94782 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
USP1O94782 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.67■□□□□ 0.9
USP1O94782 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.67■□□□□ 0.9
USP1O94782 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.67■□□□□ 0.9
USP1O94782 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP1O94782 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP1O94782 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP1O94782 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.67■□□□□ 0.9
USP1O94782 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms