Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.19■□□□□ 0.82
TRIM13O60858 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM13O60858 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM13O60858 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM13O60858 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM13O60858 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM13O60858 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM13O60858 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM13O60858 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM13O60858 POU5F1P4-201ENST00000413175 1085 ntBASIC20.18■□□□□ 0.82
TRIM13O60858 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.18■□□□□ 0.82
TRIM13O60858 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM13O60858 AC008175.2-201ENST00000612840 297 ntBASIC20.18■□□□□ 0.82
TRIM13O60858 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM13O60858 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM13O60858 RASA4CP-201ENST00000424092 1398 ntBASIC20.18■□□□□ 0.82
TRIM13O60858 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM13O60858 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM13O60858 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM13O60858 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM13O60858 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM13O60858 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM13O60858 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM13O60858 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM13O60858 EDA-201ENST00000338901 1233 ntBASIC20.17■□□□□ 0.82
TRIM13O60858 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.17■□□□□ 0.82
TRIM13O60858 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM13O60858 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM13O60858 AC012414.1-201ENST00000556676 535 ntBASIC20.17■□□□□ 0.82
TRIM13O60858 AC106739.1-201ENST00000617035 715 ntBASIC20.17■□□□□ 0.82
TRIM13O60858 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM13O60858 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM13O60858 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM13O60858 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM13O60858 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM13O60858 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM13O60858 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM13O60858 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM13O60858 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM13O60858 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
TRIM13O60858 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM13O60858 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM13O60858 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
TRIM13O60858 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM13O60858 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM13O60858 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM13O60858 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM13O60858 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM13O60858 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM13O60858 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TRIM13O60858 AC096631.2-201ENST00000436136 790 ntBASIC20.16■□□□□ 0.82
TRIM13O60858 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.16■□□□□ 0.82
TRIM13O60858 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.16■□□□□ 0.82
TRIM13O60858 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM13O60858 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM13O60858 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM13O60858 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM13O60858 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM13O60858 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM13O60858 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
TRIM13O60858 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM13O60858 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM13O60858 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM13O60858 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM13O60858 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIM13O60858 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM13O60858 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIM13O60858 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM13O60858 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIM13O60858 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM13O60858 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.15■□□□□ 0.82
TRIM13O60858 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM13O60858 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM13O60858 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM13O60858 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIM13O60858 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM13O60858 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM13O60858 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
TRIM13O60858 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
TRIM13O60858 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM13O60858 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM13O60858 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIM13O60858 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM13O60858 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM13O60858 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM13O60858 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM13O60858 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.14■□□□□ 0.81
TRIM13O60858 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM13O60858 TPRG1LP1-201ENST00000598702 760 ntBASIC20.14■□□□□ 0.81
TRIM13O60858 AL355001.2-201ENST00000620617 1191 ntBASIC20.14■□□□□ 0.81
TRIM13O60858 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM13O60858 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRIM13O60858 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRIM13O60858 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM13O60858 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM13O60858 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM13O60858 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM13O60858 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM13O60858 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM13O60858 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms