Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.78■□□□□ 0.76
PRAMEF4O60810 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PRAMEF4O60810 MIR2861-201ENST00000636310 90 ntBASIC19.78■□□□□ 0.76
PRAMEF4O60810 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.78■□□□□ 0.76
PRAMEF4O60810 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRAMEF4O60810 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRAMEF4O60810 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRAMEF4O60810 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PRAMEF4O60810 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRAMEF4O60810 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.78■□□□□ 0.76
PRAMEF4O60810 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
PRAMEF4O60810 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.77■□□□□ 0.76
PRAMEF4O60810 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF4O60810 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF4O60810 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF4O60810 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF4O60810 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF4O60810 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF4O60810 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF4O60810 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF4O60810 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF4O60810 AC007322.3-201ENST00000426526 701 ntBASIC19.77■□□□□ 0.76
PRAMEF4O60810 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.77■□□□□ 0.76
PRAMEF4O60810 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.77■□□□□ 0.76
PRAMEF4O60810 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF4O60810 AC092437.1-201ENST00000624794 1048 ntBASIC19.77■□□□□ 0.76
PRAMEF4O60810 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.77■□□□□ 0.76
PRAMEF4O60810 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF4O60810 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF4O60810 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRAMEF4O60810 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
PRAMEF4O60810 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.77■□□□□ 0.75
PRAMEF4O60810 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PRAMEF4O60810 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF4O60810 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PRAMEF4O60810 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF4O60810 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.76■□□□□ 0.75
PRAMEF4O60810 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF4O60810 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF4O60810 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.76■□□□□ 0.75
PRAMEF4O60810 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF4O60810 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF4O60810 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF4O60810 KRT18P11-201ENST00000435214 1283 ntBASIC19.76■□□□□ 0.75
PRAMEF4O60810 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PRAMEF4O60810 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.76■□□□□ 0.75
PRAMEF4O60810 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PRAMEF4O60810 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF4O60810 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PRAMEF4O60810 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.76■□□□□ 0.75
PRAMEF4O60810 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.76■□□□□ 0.75
PRAMEF4O60810 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF4O60810 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF4O60810 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRAMEF4O60810 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.76■□□□□ 0.75
PRAMEF4O60810 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF4O60810 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF4O60810 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF4O60810 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF4O60810 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.75■□□□□ 0.75
PRAMEF4O60810 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF4O60810 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 AC016405.3-201ENST00000607710 860 ntBASIC19.75■□□□□ 0.75
PRAMEF4O60810 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF4O60810 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF4O60810 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF4O60810 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF4O60810 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF4O60810 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PRAMEF4O60810 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF4O60810 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF4O60810 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF4O60810 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF4O60810 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF4O60810 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF4O60810 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF4O60810 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.74■□□□□ 0.75
PRAMEF4O60810 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.74■□□□□ 0.75
PRAMEF4O60810 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PRAMEF4O60810 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF4O60810 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.74■□□□□ 0.75
PRAMEF4O60810 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF4O60810 AC016769.1-201ENST00000409132 1010 ntBASIC19.74■□□□□ 0.75
PRAMEF4O60810 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.74■□□□□ 0.75
PRAMEF4O60810 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.74■□□□□ 0.75
PRAMEF4O60810 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.74■□□□□ 0.75
PRAMEF4O60810 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF4O60810 IKBKGP1-201ENST00000612193 1073 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms