Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZIC3O60481 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.52■□□□□ 0.56
ZIC3O60481 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.52■□□□□ 0.56
ZIC3O60481 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZIC3O60481 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.52■□□□□ 0.56
ZIC3O60481 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.52■□□□□ 0.56
ZIC3O60481 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ZIC3O60481 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZIC3O60481 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZIC3O60481 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZIC3O60481 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZIC3O60481 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZIC3O60481 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.52■□□□□ 0.55
ZIC3O60481 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZIC3O60481 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.51■□□□□ 0.55
ZIC3O60481 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.51■□□□□ 0.55
ZIC3O60481 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ZIC3O60481 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.51■□□□□ 0.55
ZIC3O60481 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.51■□□□□ 0.55
ZIC3O60481 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZIC3O60481 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZIC3O60481 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZIC3O60481 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
ZIC3O60481 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZIC3O60481 AL589743.5-201ENST00000616611 1050 ntBASIC18.51■□□□□ 0.55
ZIC3O60481 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZIC3O60481 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ZIC3O60481 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ZIC3O60481 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZIC3O60481 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZIC3O60481 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZIC3O60481 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZIC3O60481 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZIC3O60481 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
ZIC3O60481 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ZIC3O60481 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.5■□□□□ 0.55
ZIC3O60481 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZIC3O60481 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZIC3O60481 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ZIC3O60481 DUSP5P2-201ENST00000426873 1033 ntBASIC18.5■□□□□ 0.55
ZIC3O60481 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.5■□□□□ 0.55
ZIC3O60481 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.5■□□□□ 0.55
ZIC3O60481 AC091874.3-201ENST00000512672 1195 ntBASIC18.5■□□□□ 0.55
ZIC3O60481 MYC-209ENST00000641252 345 ntBASIC18.5■□□□□ 0.55
ZIC3O60481 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZIC3O60481 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZIC3O60481 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZIC3O60481 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.5■□□□□ 0.55
ZIC3O60481 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ZIC3O60481 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZIC3O60481 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.5■□□□□ 0.55
ZIC3O60481 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
ZIC3O60481 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZIC3O60481 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ZIC3O60481 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZIC3O60481 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.49■□□□□ 0.55
ZIC3O60481 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZIC3O60481 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZIC3O60481 AL137060.1-201ENST00000618151 2648 ntBASIC18.49■□□□□ 0.55
ZIC3O60481 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZIC3O60481 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.49■□□□□ 0.55
ZIC3O60481 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.49■□□□□ 0.55
ZIC3O60481 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.49■□□□□ 0.55
ZIC3O60481 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.49■□□□□ 0.55
ZIC3O60481 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.49■□□□□ 0.55
ZIC3O60481 MIR2861-201ENST00000636310 90 ntBASIC18.49■□□□□ 0.55
ZIC3O60481 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.49■□□□□ 0.55
ZIC3O60481 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZIC3O60481 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZIC3O60481 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ZIC3O60481 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZIC3O60481 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ZIC3O60481 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZIC3O60481 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.49■□□□□ 0.55
ZIC3O60481 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ZIC3O60481 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
ZIC3O60481 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZIC3O60481 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.48■□□□□ 0.55
ZIC3O60481 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ZIC3O60481 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.48■□□□□ 0.55
ZIC3O60481 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZIC3O60481 PGM5P4-201ENST00000421970 445 ntBASIC18.48■□□□□ 0.55
ZIC3O60481 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZIC3O60481 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZIC3O60481 AC097658.1-201ENST00000475555 843 ntBASIC18.48■□□□□ 0.55
ZIC3O60481 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.48■□□□□ 0.55
ZIC3O60481 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.48■□□□□ 0.55
ZIC3O60481 AL356652.1-201ENST00000615962 565 ntBASIC18.48■□□□□ 0.55
ZIC3O60481 AC105020.6-201ENST00000621523 1217 ntBASIC18.48■□□□□ 0.55
ZIC3O60481 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZIC3O60481 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ZIC3O60481 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.48■□□□□ 0.55
ZIC3O60481 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZIC3O60481 AC006128.1-201ENST00000624704 1661 ntBASIC18.47■□□□□ 0.55
ZIC3O60481 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
ZIC3O60481 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZIC3O60481 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.47■□□□□ 0.55
ZIC3O60481 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZIC3O60481 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
ZIC3O60481 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms