Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.32■□□□□ 0.84
ZFC3H1O60293 AC087633.2-202ENST00000565166 1439 ntBASIC20.32■□□□□ 0.84
ZFC3H1O60293 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFC3H1O60293 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.32■□□□□ 0.84
ZFC3H1O60293 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.32■□□□□ 0.84
ZFC3H1O60293 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFC3H1O60293 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.32■□□□□ 0.84
ZFC3H1O60293 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFC3H1O60293 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFC3H1O60293 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.32■□□□□ 0.84
ZFC3H1O60293 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.32■□□□□ 0.84
ZFC3H1O60293 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFC3H1O60293 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.31■□□□□ 0.84
ZFC3H1O60293 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFC3H1O60293 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFC3H1O60293 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFC3H1O60293 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZFC3H1O60293 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ZFC3H1O60293 KRT18P6-201ENST00000555540 1265 ntBASIC20.31■□□□□ 0.84
ZFC3H1O60293 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.31■□□□□ 0.84
ZFC3H1O60293 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFC3H1O60293 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFC3H1O60293 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFC3H1O60293 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZFC3H1O60293 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFC3H1O60293 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.31■□□□□ 0.84
ZFC3H1O60293 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFC3H1O60293 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ZFC3H1O60293 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 TSPY20P-201ENST00000450910 630 ntBASIC20.3■□□□□ 0.84
ZFC3H1O60293 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 MIR4651-201ENST00000582622 73 ntBASIC20.3■□□□□ 0.84
ZFC3H1O60293 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.3■□□□□ 0.84
ZFC3H1O60293 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ZFC3H1O60293 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ZFC3H1O60293 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ZFC3H1O60293 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.3■□□□□ 0.84
ZFC3H1O60293 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.3■□□□□ 0.84
ZFC3H1O60293 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.3■□□□□ 0.84
ZFC3H1O60293 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.3■□□□□ 0.84
ZFC3H1O60293 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ZFC3H1O60293 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFC3H1O60293 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ZFC3H1O60293 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZFC3H1O60293 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZFC3H1O60293 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.29■□□□□ 0.84
ZFC3H1O60293 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZFC3H1O60293 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ZFC3H1O60293 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZFC3H1O60293 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
ZFC3H1O60293 AL591742.1-201ENST00000604433 565 ntBASIC20.29■□□□□ 0.84
ZFC3H1O60293 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.29■□□□□ 0.84
ZFC3H1O60293 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.29■□□□□ 0.84
ZFC3H1O60293 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZFC3H1O60293 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZFC3H1O60293 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZFC3H1O60293 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.28■□□□□ 0.84
ZFC3H1O60293 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.28■□□□□ 0.84
ZFC3H1O60293 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ZFC3H1O60293 MYC-209ENST00000641252 345 ntBASIC20.28■□□□□ 0.84
ZFC3H1O60293 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.28■□□□□ 0.84
ZFC3H1O60293 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ZFC3H1O60293 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZFC3H1O60293 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.28■□□□□ 0.84
ZFC3H1O60293 AL121603.2-201ENST00000557373 2117 ntBASIC20.28■□□□□ 0.84
ZFC3H1O60293 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZFC3H1O60293 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZFC3H1O60293 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZFC3H1O60293 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ZFC3H1O60293 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZFC3H1O60293 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.28■□□□□ 0.84
ZFC3H1O60293 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ZFC3H1O60293 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.28■□□□□ 0.84
ZFC3H1O60293 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.28■□□□□ 0.84
ZFC3H1O60293 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZFC3H1O60293 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZFC3H1O60293 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.27■□□□□ 0.84
ZFC3H1O60293 AC116050.2-201ENST00000612102 1779 ntBASIC20.27■□□□□ 0.84
ZFC3H1O60293 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZFC3H1O60293 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.27■□□□□ 0.84
ZFC3H1O60293 AC093787.1-201ENST00000450396 207 ntBASIC20.27■□□□□ 0.84
ZFC3H1O60293 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.27■□□□□ 0.84
ZFC3H1O60293 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.27■□□□□ 0.84
ZFC3H1O60293 CD99P1-205ENST00000527459 561 ntBASIC20.27■□□□□ 0.84
ZFC3H1O60293 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZFC3H1O60293 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZFC3H1O60293 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ZFC3H1O60293 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
ZFC3H1O60293 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms