Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DUX1O43812 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DUX1O43812 UNC93B4-201ENST00000505679 747 ntBASIC19.72■□□□□ 0.75
DUX1O43812 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DUX1O43812 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.72■□□□□ 0.75
DUX1O43812 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.72■□□□□ 0.75
DUX1O43812 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DUX1O43812 AP006294.2-201ENST00000641667 209 ntBASIC19.72■□□□□ 0.75
DUX1O43812 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
DUX1O43812 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DUX1O43812 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.72■□□□□ 0.75
DUX1O43812 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
DUX1O43812 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DUX1O43812 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
DUX1O43812 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DUX1O43812 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DUX1O43812 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
DUX1O43812 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.71■□□□□ 0.75
DUX1O43812 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DUX1O43812 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DUX1O43812 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DUX1O43812 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
DUX1O43812 AL158047.1-201ENST00000445918 881 ntBASIC19.71■□□□□ 0.75
DUX1O43812 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DUX1O43812 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DUX1O43812 AC142381.4-202ENST00000563973 229 ntBASIC19.71■□□□□ 0.75
DUX1O43812 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.71■□□□□ 0.75
DUX1O43812 SOX15-203ENST00000570788 1093 ntBASIC19.71■□□□□ 0.75
DUX1O43812 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.71■□□□□ 0.75
DUX1O43812 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
DUX1O43812 AC008403.3-201ENST00000598924 454 ntBASIC19.71■□□□□ 0.75
DUX1O43812 AL356652.1-201ENST00000615962 565 ntBASIC19.71■□□□□ 0.75
DUX1O43812 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
DUX1O43812 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.71■□□□□ 0.75
DUX1O43812 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.71■□□□□ 0.75
DUX1O43812 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
DUX1O43812 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
DUX1O43812 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DUX1O43812 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUX1O43812 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUX1O43812 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUX1O43812 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUX1O43812 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.7■□□□□ 0.74
DUX1O43812 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUX1O43812 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUX1O43812 KRT17P3-201ENST00000420566 1262 ntBASIC19.7■□□□□ 0.74
DUX1O43812 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.7■□□□□ 0.74
DUX1O43812 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.7■□□□□ 0.74
DUX1O43812 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.7■□□□□ 0.74
DUX1O43812 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.7■□□□□ 0.74
DUX1O43812 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.7■□□□□ 0.74
DUX1O43812 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.7■□□□□ 0.74
DUX1O43812 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DUX1O43812 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUX1O43812 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUX1O43812 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.7■□□□□ 0.74
DUX1O43812 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUX1O43812 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.7■□□□□ 0.74
DUX1O43812 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DUX1O43812 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
DUX1O43812 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DUX1O43812 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DUX1O43812 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DUX1O43812 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DUX1O43812 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.69■□□□□ 0.74
DUX1O43812 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
DUX1O43812 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DUX1O43812 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DUX1O43812 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DUX1O43812 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.69■□□□□ 0.74
DUX1O43812 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.69■□□□□ 0.74
DUX1O43812 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.69■□□□□ 0.74
DUX1O43812 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
DUX1O43812 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.69■□□□□ 0.74
DUX1O43812 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.69■□□□□ 0.74
DUX1O43812 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.69■□□□□ 0.74
DUX1O43812 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DUX1O43812 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
DUX1O43812 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.69■□□□□ 0.74
DUX1O43812 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
DUX1O43812 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.69■□□□□ 0.74
DUX1O43812 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.69■□□□□ 0.74
DUX1O43812 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DUX1O43812 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DUX1O43812 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
DUX1O43812 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
DUX1O43812 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.68■□□□□ 0.74
DUX1O43812 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DUX1O43812 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.68■□□□□ 0.74
DUX1O43812 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.68■□□□□ 0.74
DUX1O43812 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DUX1O43812 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
DUX1O43812 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.68■□□□□ 0.74
DUX1O43812 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
DUX1O43812 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DUX1O43812 FBXW4P1-201ENST00000426721 2239 ntBASIC19.68■□□□□ 0.74
DUX1O43812 AC011484.1-201ENST00000377652 1995 ntBASIC19.68■□□□□ 0.74
DUX1O43812 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DUX1O43812 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DUX1O43812 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms