Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RRP8O43159 AL355355.2-201ENST00000442321 338 ntBASIC19.35■□□□□ 0.69
RRP8O43159 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.35■□□□□ 0.69
RRP8O43159 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.35■□□□□ 0.69
RRP8O43159 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RRP8O43159 AC026471.5-201ENST00000615068 467 ntBASIC19.35■□□□□ 0.69
RRP8O43159 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.35■□□□□ 0.69
RRP8O43159 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RRP8O43159 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RRP8O43159 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
RRP8O43159 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RRP8O43159 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RRP8O43159 CYP21A1P-202ENST00000354927 1481 ntBASIC19.35■□□□□ 0.69
RRP8O43159 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RRP8O43159 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RRP8O43159 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RRP8O43159 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RRP8O43159 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RRP8O43159 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RRP8O43159 C2orf69P4-201ENST00000565394 541 ntBASIC19.34■□□□□ 0.69
RRP8O43159 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RRP8O43159 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RRP8O43159 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RRP8O43159 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RRP8O43159 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.33■□□□□ 0.69
RRP8O43159 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.33■□□□□ 0.69
RRP8O43159 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RRP8O43159 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RRP8O43159 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.33■□□□□ 0.69
RRP8O43159 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RRP8O43159 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RRP8O43159 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RRP8O43159 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RRP8O43159 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RRP8O43159 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RRP8O43159 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RRP8O43159 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RRP8O43159 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RRP8O43159 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.33■□□□□ 0.69
RRP8O43159 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RRP8O43159 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RRP8O43159 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.33■□□□□ 0.68
RRP8O43159 AP003071.4-201ENST00000562276 1284 ntBASIC19.33■□□□□ 0.68
RRP8O43159 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.33■□□□□ 0.68
RRP8O43159 AC005363.2-201ENST00000618631 242 ntBASIC19.33■□□□□ 0.68
RRP8O43159 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RRP8O43159 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RRP8O43159 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RRP8O43159 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.33■□□□□ 0.68
RRP8O43159 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RRP8O43159 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RRP8O43159 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RRP8O43159 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RRP8O43159 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.33■□□□□ 0.68
RRP8O43159 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RRP8O43159 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.32■□□□□ 0.68
RRP8O43159 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.32■□□□□ 0.68
RRP8O43159 AL117328.2-201ENST00000624617 1940 ntBASIC19.32■□□□□ 0.68
RRP8O43159 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.32■□□□□ 0.68
RRP8O43159 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.32■□□□□ 0.68
RRP8O43159 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
RRP8O43159 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RRP8O43159 AL353708.3-201ENST00000610272 989 ntBASIC19.32■□□□□ 0.68
RRP8O43159 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.32■□□□□ 0.68
RRP8O43159 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.32■□□□□ 0.68
RRP8O43159 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.32■□□□□ 0.68
RRP8O43159 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RRP8O43159 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RRP8O43159 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RRP8O43159 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RRP8O43159 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.31■□□□□ 0.68
RRP8O43159 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RRP8O43159 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RRP8O43159 AL390719.1-204ENST00000412397 1219 ntBASIC19.31■□□□□ 0.68
RRP8O43159 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RRP8O43159 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.31■□□□□ 0.68
RRP8O43159 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RRP8O43159 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RRP8O43159 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
RRP8O43159 AC137767.1-201ENST00000602918 1920 ntBASIC19.31■□□□□ 0.68
RRP8O43159 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RRP8O43159 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RRP8O43159 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RRP8O43159 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms