Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.79■□□□□ 0.92
NPC1O15118 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.79■□□□□ 0.92
NPC1O15118 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.79■□□□□ 0.92
NPC1O15118 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.79■□□□□ 0.92
NPC1O15118 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.79■□□□□ 0.92
NPC1O15118 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPC1O15118 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
NPC1O15118 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPC1O15118 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
NPC1O15118 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1O15118 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1O15118 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.78■□□□□ 0.92
NPC1O15118 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1O15118 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.78■□□□□ 0.92
NPC1O15118 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1O15118 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.78■□□□□ 0.92
NPC1O15118 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.78■□□□□ 0.92
NPC1O15118 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NPC1O15118 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.78■□□□□ 0.92
NPC1O15118 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.78■□□□□ 0.92
NPC1O15118 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.78■□□□□ 0.92
NPC1O15118 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.78■□□□□ 0.92
NPC1O15118 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.78■□□□□ 0.92
NPC1O15118 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1O15118 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NPC1O15118 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1O15118 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1O15118 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1O15118 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1O15118 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1O15118 AL158047.1-201ENST00000445918 881 ntBASIC20.77■□□□□ 0.92
NPC1O15118 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.77■□□□□ 0.92
NPC1O15118 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.77■□□□□ 0.92
NPC1O15118 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.77■□□□□ 0.92
NPC1O15118 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.77■□□□□ 0.92
NPC1O15118 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
NPC1O15118 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NPC1O15118 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.77■□□□□ 0.91
NPC1O15118 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPC1O15118 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPC1O15118 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPC1O15118 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NPC1O15118 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPC1O15118 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPC1O15118 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NPC1O15118 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPC1O15118 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPC1O15118 UBE2SP1-201ENST00000450587 669 ntBASIC20.76■□□□□ 0.91
NPC1O15118 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.76■□□□□ 0.91
NPC1O15118 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.76■□□□□ 0.91
NPC1O15118 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.76■□□□□ 0.91
NPC1O15118 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.76■□□□□ 0.91
NPC1O15118 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.76■□□□□ 0.91
NPC1O15118 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPC1O15118 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPC1O15118 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPC1O15118 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPC1O15118 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPC1O15118 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.76■□□□□ 0.91
NPC1O15118 FBXW4P1-201ENST00000426721 2239 ntBASIC20.76■□□□□ 0.91
NPC1O15118 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.75■□□□□ 0.91
NPC1O15118 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.75■□□□□ 0.91
NPC1O15118 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.75■□□□□ 0.91
NPC1O15118 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPC1O15118 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NPC1O15118 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NPC1O15118 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPC1O15118 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NPC1O15118 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.75■□□□□ 0.91
NPC1O15118 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPC1O15118 SOX15-203ENST00000570788 1093 ntBASIC20.75■□□□□ 0.91
NPC1O15118 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.75■□□□□ 0.91
NPC1O15118 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
NPC1O15118 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPC1O15118 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NPC1O15118 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPC1O15118 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
NPC1O15118 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NPC1O15118 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPC1O15118 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPC1O15118 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPC1O15118 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPC1O15118 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPC1O15118 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPC1O15118 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPC1O15118 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.74■□□□□ 0.91
NPC1O15118 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPC1O15118 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.74■□□□□ 0.91
NPC1O15118 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
NPC1O15118 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.74■□□□□ 0.91
NPC1O15118 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.74■□□□□ 0.91
NPC1O15118 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.74■□□□□ 0.91
NPC1O15118 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.74■□□□□ 0.91
NPC1O15118 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.74■□□□□ 0.91
NPC1O15118 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NPC1O15118 AL356652.1-201ENST00000615962 565 ntBASIC20.74■□□□□ 0.91
NPC1O15118 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.74■□□□□ 0.91
NPC1O15118 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPC1O15118 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.73■□□□□ 0.91
NPC1O15118 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms