Protein–RNA interactions for Protein: O15111

CHUK, Inhibitor of nuclear factor kappa-B kinase subunit alpha, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHUKO15111 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.03■□□□□ 0.96
CHUKO15111 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.03■□□□□ 0.96
CHUKO15111 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
CHUKO15111 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHUKO15111 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHUKO15111 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHUKO15111 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHUKO15111 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHUKO15111 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.03■□□□□ 0.96
CHUKO15111 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHUKO15111 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHUKO15111 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHUKO15111 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHUKO15111 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHUKO15111 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHUKO15111 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHUKO15111 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CHUKO15111 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CHUKO15111 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHUKO15111 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHUKO15111 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.02■□□□□ 0.96
CHUKO15111 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.02■□□□□ 0.96
CHUKO15111 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.02■□□□□ 0.96
CHUKO15111 AC022517.1-201ENST00000592429 346 ntBASIC21.02■□□□□ 0.96
CHUKO15111 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
CHUKO15111 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.02■□□□□ 0.96
CHUKO15111 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.95
CHUKO15111 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHUKO15111 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CHUKO15111 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CHUKO15111 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHUKO15111 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHUKO15111 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHUKO15111 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHUKO15111 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CHUKO15111 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.01■□□□□ 0.95
CHUKO15111 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.01■□□□□ 0.95
CHUKO15111 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CHUKO15111 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHUKO15111 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.01■□□□□ 0.95
CHUKO15111 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHUKO15111 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHUKO15111 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHUKO15111 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CHUKO15111 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHUKO15111 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHUKO15111 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CHUKO15111 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHUKO15111 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21■□□□□ 0.95
CHUKO15111 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21■□□□□ 0.95
CHUKO15111 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21■□□□□ 0.95
CHUKO15111 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHUKO15111 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21■□□□□ 0.95
CHUKO15111 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CHUKO15111 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
CHUKO15111 AC092666.2-201ENST00000613287 246 ntBASIC21■□□□□ 0.95
CHUKO15111 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHUKO15111 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHUKO15111 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHUKO15111 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHUKO15111 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHUKO15111 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21■□□□□ 0.95
CHUKO15111 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21■□□□□ 0.95
CHUKO15111 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21■□□□□ 0.95
CHUKO15111 AC018445.3-201ENST00000624177 1945 ntBASIC21■□□□□ 0.95
CHUKO15111 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21■□□□□ 0.95
CHUKO15111 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.99■□□□□ 0.95
CHUKO15111 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.99■□□□□ 0.95
CHUKO15111 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.99■□□□□ 0.95
CHUKO15111 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHUKO15111 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.99■□□□□ 0.95
CHUKO15111 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHUKO15111 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.99■□□□□ 0.95
CHUKO15111 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.99■□□□□ 0.95
CHUKO15111 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.99■□□□□ 0.95
CHUKO15111 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.99■□□□□ 0.95
CHUKO15111 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.99■□□□□ 0.95
CHUKO15111 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.99■□□□□ 0.95
CHUKO15111 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHUKO15111 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHUKO15111 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHUKO15111 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.99■□□□□ 0.95
CHUKO15111 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHUKO15111 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHUKO15111 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHUKO15111 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
CHUKO15111 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHUKO15111 BX323043.1-201ENST00000641006 1765 ntBASIC20.98■□□□□ 0.95
CHUKO15111 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHUKO15111 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHUKO15111 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHUKO15111 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHUKO15111 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHUKO15111 KRT19P1-201ENST00000405746 1186 ntBASIC20.98■□□□□ 0.95
CHUKO15111 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.98■□□□□ 0.95
CHUKO15111 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.98■□□□□ 0.95
CHUKO15111 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.98■□□□□ 0.95
CHUKO15111 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CHUKO15111 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHUKO15111 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms