Protein–RNA interactions for Protein: O00213

APBB1, Amyloid-beta A4 precursor protein-binding family B member 1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB1O00213 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
APBB1O00213 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
APBB1O00213 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
APBB1O00213 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
APBB1O00213 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
APBB1O00213 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
APBB1O00213 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC25.55■■□□□ 1.68
APBB1O00213 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
APBB1O00213 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
APBB1O00213 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
APBB1O00213 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
APBB1O00213 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
APBB1O00213 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.55■■□□□ 1.68
APBB1O00213 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.55■■□□□ 1.68
APBB1O00213 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.55■■□□□ 1.68
APBB1O00213 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
APBB1O00213 FP700111.2-201ENST00000619190 1892 ntBASIC25.55■■□□□ 1.68
APBB1O00213 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
APBB1O00213 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
APBB1O00213 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
APBB1O00213 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
APBB1O00213 AC116050.2-201ENST00000612102 1779 ntBASIC25.54■■□□□ 1.68
APBB1O00213 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
APBB1O00213 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC25.54■■□□□ 1.68
APBB1O00213 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
APBB1O00213 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
APBB1O00213 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.54■■□□□ 1.68
APBB1O00213 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.54■■□□□ 1.68
APBB1O00213 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.54■■□□□ 1.68
APBB1O00213 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
APBB1O00213 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
APBB1O00213 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC25.54■■□□□ 1.68
APBB1O00213 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
APBB1O00213 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
APBB1O00213 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
APBB1O00213 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.54■■□□□ 1.68
APBB1O00213 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
APBB1O00213 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
APBB1O00213 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.53■■□□□ 1.68
APBB1O00213 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.53■■□□□ 1.68
APBB1O00213 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
APBB1O00213 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.53■■□□□ 1.68
APBB1O00213 AC016405.3-201ENST00000607710 860 ntBASIC25.53■■□□□ 1.68
APBB1O00213 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.53■■□□□ 1.68
APBB1O00213 AC013268.1-206ENST00000638368 961 ntBASIC25.53■■□□□ 1.68
APBB1O00213 AC112229.1-201ENST00000639295 961 ntBASIC25.53■■□□□ 1.68
APBB1O00213 AC073111.5-205ENST00000641717 521 ntBASIC25.53■■□□□ 1.68
APBB1O00213 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
APBB1O00213 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
APBB1O00213 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25.53■■□□□ 1.68
APBB1O00213 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.53■■□□□ 1.68
APBB1O00213 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
APBB1O00213 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC25.52■■□□□ 1.68
APBB1O00213 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
APBB1O00213 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
APBB1O00213 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
APBB1O00213 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.52■■□□□ 1.68
APBB1O00213 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.52■■□□□ 1.68
APBB1O00213 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
APBB1O00213 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
APBB1O00213 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.52■■□□□ 1.68
APBB1O00213 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.52■■□□□ 1.68
APBB1O00213 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.68
APBB1O00213 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.52■■□□□ 1.68
APBB1O00213 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
APBB1O00213 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
APBB1O00213 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
APBB1O00213 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
APBB1O00213 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
APBB1O00213 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
APBB1O00213 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.51■■□□□ 1.67
APBB1O00213 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
APBB1O00213 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.51■■□□□ 1.67
APBB1O00213 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
APBB1O00213 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
APBB1O00213 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
APBB1O00213 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.51■■□□□ 1.67
APBB1O00213 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
APBB1O00213 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
APBB1O00213 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC25.51■■□□□ 1.67
APBB1O00213 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
APBB1O00213 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
APBB1O00213 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
APBB1O00213 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
APBB1O00213 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
APBB1O00213 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
APBB1O00213 AC007322.3-201ENST00000426526 701 ntBASIC25.5■■□□□ 1.67
APBB1O00213 CDCA4P2-201ENST00000441182 718 ntBASIC25.5■■□□□ 1.67
APBB1O00213 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
APBB1O00213 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
APBB1O00213 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.5■■□□□ 1.67
APBB1O00213 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.5■■□□□ 1.67
APBB1O00213 AC092667.1-201ENST00000434301 2586 ntBASIC25.5■■□□□ 1.67
APBB1O00213 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
APBB1O00213 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.49■■□□□ 1.67
APBB1O00213 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
APBB1O00213 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
APBB1O00213 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.49■■□□□ 1.67
APBB1O00213 AC068338.2-201ENST00000563278 1430 ntBASIC25.49■■□□□ 1.67
APBB1O00213 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms