Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.12■□□□□ 0.65
CLCA1A8K7I4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA1A8K7I4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.12■□□□□ 0.65
CLCA1A8K7I4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.12■□□□□ 0.65
CLCA1A8K7I4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CLCA1A8K7I4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CLCA1A8K7I4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCA1A8K7I4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCA1A8K7I4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA1A8K7I4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA1A8K7I4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA1A8K7I4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCA1A8K7I4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCA1A8K7I4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCA1A8K7I4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CLCA1A8K7I4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA1A8K7I4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLCA1A8K7I4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA1A8K7I4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA1A8K7I4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA1A8K7I4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA1A8K7I4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA1A8K7I4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLCA1A8K7I4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA1A8K7I4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLCA1A8K7I4 AC080038.1-201ENST00000611274 1154 ntBASIC19.09■□□□□ 0.65
CLCA1A8K7I4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CLCA1A8K7I4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCA1A8K7I4 AFG3L1P-217ENST00000557444 2447 ntBASIC19.09■□□□□ 0.65
CLCA1A8K7I4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCA1A8K7I4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLCA1A8K7I4 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.08■□□□□ 0.65
CLCA1A8K7I4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCA1A8K7I4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCA1A8K7I4 AL391422.3-201ENST00000603791 2761 ntBASIC19.08■□□□□ 0.65
CLCA1A8K7I4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCA1A8K7I4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCA1A8K7I4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.08■□□□□ 0.65
CLCA1A8K7I4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA1A8K7I4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA1A8K7I4 KRT18P11-201ENST00000435214 1283 ntBASIC19.08■□□□□ 0.64
CLCA1A8K7I4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA1A8K7I4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA1A8K7I4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA1A8K7I4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.08■□□□□ 0.64
CLCA1A8K7I4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.08■□□□□ 0.64
CLCA1A8K7I4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.08■□□□□ 0.64
CLCA1A8K7I4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA1A8K7I4 BID-214ENST00000617586 542 ntTSL 5 BASIC19.08■□□□□ 0.64
CLCA1A8K7I4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.08■□□□□ 0.64
CLCA1A8K7I4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA1A8K7I4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLCA1A8K7I4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms