Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 AC120498.8-201ENST00000614275 531 ntBASIC20.16■□□□□ 0.82
C4orf47A7E2U8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 RARRES2P10-201ENST00000564312 460 ntBASIC20.15■□□□□ 0.82
C4orf47A7E2U8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 AL353708.3-201ENST00000610272 989 ntBASIC20.15■□□□□ 0.82
C4orf47A7E2U8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
C4orf47A7E2U8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
C4orf47A7E2U8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
C4orf47A7E2U8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 AC087742.1-201ENST00000575880 1738 ntBASIC20.14■□□□□ 0.81
C4orf47A7E2U8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 C2orf69P4-201ENST00000565394 541 ntBASIC20.14■□□□□ 0.81
C4orf47A7E2U8 AL049597.2-201ENST00000565575 961 ntBASIC20.14■□□□□ 0.81
C4orf47A7E2U8 AL590326.2-201ENST00000625139 305 ntBASIC20.14■□□□□ 0.81
C4orf47A7E2U8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
C4orf47A7E2U8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
C4orf47A7E2U8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
C4orf47A7E2U8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C4orf47A7E2U8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C4orf47A7E2U8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
C4orf47A7E2U8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.13■□□□□ 0.81
C4orf47A7E2U8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.13■□□□□ 0.81
C4orf47A7E2U8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
C4orf47A7E2U8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.13■□□□□ 0.81
C4orf47A7E2U8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
C4orf47A7E2U8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
C4orf47A7E2U8 C11orf96-202ENST00000528572 1834 ntBASIC20.13■□□□□ 0.81
C4orf47A7E2U8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
C4orf47A7E2U8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.13■□□□□ 0.81
C4orf47A7E2U8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 AC006557.6-201ENST00000623071 864 ntBASIC20.12■□□□□ 0.81
C4orf47A7E2U8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
C4orf47A7E2U8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.11■□□□□ 0.81
C4orf47A7E2U8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C4orf47A7E2U8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms