Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 AC083906.2-201ENST00000511578 360 ntBASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 FEM1AP1-201ENST00000431297 1995 ntBASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 LINC01006-201ENST00000333319 2292 ntBASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SLC7A5P2-201ENST00000553010 536 ntBASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV4S1A1TA0A5B7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
TCRBV4S1A1TA0A5B7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.46■□□□□ 0.22
TCRBV4S1A1TA0A5B7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TCRBV4S1A1TA0A5B7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SLC29A4P1-201ENST00000398760 971 ntBASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SLC7A5P1-201ENST00000568957 537 ntBASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV4S1A1TA0A5B7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 POU5F1P4-201ENST00000413175 1085 ntBASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 TERF1P5-201ENST00000477545 1207 ntBASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 AC013268.1-206ENST00000638368 961 ntBASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 AC112229.1-201ENST00000639295 961 ntBASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TCRBV4S1A1TA0A5B7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms