Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TMEM238LA0A1B0GVL6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM238LA0A1B0GVL6 AL049796.1-201ENST00000565336 1766 ntBASIC14.37□□□□□ -0.11
TMEM238LA0A1B0GVL6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM238LA0A1B0GVL6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM238LA0A1B0GVL6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM238LA0A1B0GVL6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM238LA0A1B0GVL6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 AL512408.1-201ENST00000569378 2000 ntBASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 AC136428.2-201ENST00000563187 214 ntBASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM238LA0A1B0GVL6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM238LA0A1B0GVL6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 STK33P1-201ENST00000423835 1218 ntBASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 AC097358.2-201ENST00000607541 1159 ntBASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 AP000974.1-201ENST00000623909 2387 ntBASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM238LA0A1B0GVL6 AC004408.2-201ENST00000623613 2777 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms