Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PNMA6EA0A0J9YXQ4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
PNMA6EA0A0J9YXQ4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.53■■□□□ 1.68
PNMA6EA0A0J9YXQ4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.53■■□□□ 1.68
PNMA6EA0A0J9YXQ4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PNMA6EA0A0J9YXQ4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PNMA6EA0A0J9YXQ4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.52■■□□□ 1.68
PNMA6EA0A0J9YXQ4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
PNMA6EA0A0J9YXQ4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PNMA6EA0A0J9YXQ4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PNMA6EA0A0J9YXQ4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC25.52■■□□□ 1.68
PNMA6EA0A0J9YXQ4 AC100791.3-201ENST00000617619 330 ntBASIC25.52■■□□□ 1.68
PNMA6EA0A0J9YXQ4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC25.52■■□□□ 1.68
PNMA6EA0A0J9YXQ4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
PNMA6EA0A0J9YXQ4 KRT17P1-201ENST00000399211 1546 ntBASIC25.52■■□□□ 1.68
PNMA6EA0A0J9YXQ4 MKRN4P-201ENST00000444706 1521 ntBASIC25.52■■□□□ 1.68
PNMA6EA0A0J9YXQ4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PNMA6EA0A0J9YXQ4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC25.51■■□□□ 1.67
PNMA6EA0A0J9YXQ4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PNMA6EA0A0J9YXQ4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
PNMA6EA0A0J9YXQ4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PNMA6EA0A0J9YXQ4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.5■■□□□ 1.67
PNMA6EA0A0J9YXQ4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PNMA6EA0A0J9YXQ4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PNMA6EA0A0J9YXQ4 AL138781.1-201ENST00000566567 1274 ntBASIC25.5■■□□□ 1.67
PNMA6EA0A0J9YXQ4 CYP2T3P-201ENST00000601990 817 ntBASIC25.5■■□□□ 1.67
PNMA6EA0A0J9YXQ4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
PNMA6EA0A0J9YXQ4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC25.5■■□□□ 1.67
PNMA6EA0A0J9YXQ4 FP700111.2-201ENST00000619190 1892 ntBASIC25.5■■□□□ 1.67
PNMA6EA0A0J9YXQ4 MIR2861-201ENST00000636310 90 ntBASIC25.5■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 MCRIP2P1-201ENST00000394346 511 ntBASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 AC098934.4-201ENST00000564127 592 ntBASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 AC007225.1-201ENST00000566331 1836 ntBASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PNMA6EA0A0J9YXQ4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PNMA6EA0A0J9YXQ4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
PNMA6EA0A0J9YXQ4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PNMA6EA0A0J9YXQ4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PNMA6EA0A0J9YXQ4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PNMA6EA0A0J9YXQ4 MIPEPP3-201ENST00000412105 444 ntBASIC25.48■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC25.48■■□□□ 1.67
PNMA6EA0A0J9YXQ4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.48■■□□□ 1.67
PNMA6EA0A0J9YXQ4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
PNMA6EA0A0J9YXQ4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
PNMA6EA0A0J9YXQ4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 AC087633.2-202ENST00000565166 1439 ntBASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.47■■□□□ 1.67
PNMA6EA0A0J9YXQ4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms