Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV3A0A0B4J244 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 AC027612.3-201ENST00000413684 1047 ntBASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 SLC7A5P2-201ENST00000553010 536 ntBASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 AC099778.1-201ENST00000568593 1911 ntBASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV3A0A0B4J244 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 AC010141.2-201ENST00000452426 721 ntBASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 AC104187.1-201ENST00000607510 612 ntBASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV3A0A0B4J244 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 KRT16P2-201ENST00000414673 1423 ntBASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 AC245052.3-201ENST00000450182 901 ntBASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV3A0A0B4J244 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 LINC02228-203ENST00000641970 1355 ntBASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV3A0A0B4J244 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms