Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV27A0A087WT01 AC112907.3-201ENST00000577781 2400 ntBASIC18.58■□□□□ 0.57
TRAV27A0A087WT01 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 SLC7A5P2-201ENST00000553010 536 ntBASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.56
TRAV27A0A087WT01 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 DUX4L2-201ENST00000561772 1275 ntBASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 DUX4L6-201ENST00000626483 1275 ntBASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 DUX4L1-201ENST00000627662 1275 ntBASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 DUX4L8-201ENST00000629013 1275 ntBASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 DUX4L3-201ENST00000630187 1275 ntBASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 DUX4L7-201ENST00000630678 1275 ntBASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 DUX4L5-201ENST00000630834 1275 ntBASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV27A0A087WT01 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 AP001160.3-201ENST00000601484 763 ntBASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV27A0A087WT01 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 AC123595.1-201ENST00000440769 1046 ntBASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 YBX1P1-201ENST00000445822 960 ntBASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 TERF1P2-201ENST00000583350 1212 ntBASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRAV27A0A087WT01 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TRAV27A0A087WT01 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms