Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TDGF1P5-201ENST00000523009 453 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 AC009806.1-201ENST00000526112 519 ntTSL 3 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 OR7E106P-201ENST00000556941 1021 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 AC112236.1-201ENST00000561977 1098 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 RN7SL381P-201ENST00000577658 298 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 RN7SL387P-201ENST00000581015 273 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 ZNF528-210ENST00000594530 544 ntTSL 3 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 AC025278.2-201ENST00000598153 1063 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 AC010615.4-201ENST00000600810 472 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 AC093107.2-201ENST00000603668 445 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 AC004004.1-201ENST00000603784 250 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 AC023302.1-201ENST00000607458 492 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 AL031587.4-201ENST00000609265 691 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 RHAG-203ENST00000618248 1203 ntTSL 5 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 NPIPB2-207ENST00000620285 1216 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 AL157931.2-201ENST00000635091 463 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 HNRNPKP1-201ENST00000510896 1379 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 COPZ1-212ENST00000551779 1462 ntAPPRIS ALT1 TSL 2 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 PAX6-246ENST00000638963 1580 ntTSL 5 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 SNX20-203ENST00000423026 2156 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 AC092620.3-201ENST00000562796 2764 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 UTRN-203ENST00000367526 3220 ntTSL 5 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 AC008895.1-201ENST00000624074 2622 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 LINC00243-201ENST00000399196 2052 ntTSL 2 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 FOLH1B-201ENST00000525540 1974 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 TROVE2-204ENST00000367445 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 AL109811.4-201ENST00000614757 1793 ntTSL 5 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 SLC25A14-215ENST00000612248 1734 ntTSL 5 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 NREP-203ENST00000395634 1468 ntTSL 2 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 Z83847.1-201ENST00000569912 1463 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 MED8-202ENST00000372455 1186 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 SPP2-202ENST00000373368 860 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 IGLV8-61-201ENST00000390283 414 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 SPACA3-203ENST00000394638 508 ntTSL 3 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 RFPL3-202ENST00000397468 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 RIMKLBP1-201ENST00000408914 1164 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 KYNU-204ENST00000410015 776 ntTSL 2 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 RN7SKP3-201ENST00000411409 358 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 FAM96AP2-201ENST00000414727 477 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 LINC01946-201ENST00000416279 418 ntTSL 5 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 COL4A2-AS1-201ENST00000417970 540 ntTSL 3 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 AC092035.1-201ENST00000418538 390 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 HNRNPA1P70-201ENST00000420836 1087 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 AL355994.1-201ENST00000424379 260 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 PSMD10P1-201ENST00000436861 681 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 NBR2-203ENST00000467245 1158 ntTSL 2 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 AC137810.1-201ENST00000510433 540 ntTSL 4 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 MEF2C-AS1-206ENST00000511100 828 ntTSL 3 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 RN7SKP64-201ENST00000517206 328 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 ENY2-208ENST00000520147 857 ntTSL 4 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 AC005186.1-201ENST00000534849 570 ntTSL 4 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 ULK4P2-205ENST00000570221 634 ntTSL 3 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 AC005828.2-201ENST00000580253 562 ntTSL 4 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 RN7SL716P-201ENST00000580539 268 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 THRA1/BTR-202ENST00000581362 902 ntTSL 3 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 AC087284.1-201ENST00000614119 1049 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 AC073107.2-201ENST00000620476 238 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 AC136603.1-201ENST00000625152 767 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 KRT7-214ENST00000638501 398 ntTSL 5 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 SOCS4-202ENST00000395472 6779 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 FGF1-204ENST00000378046 2582 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 GNE-206ENST00000543356 2576 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 AC044810.2-202ENST00000527847 2503 ntTSL 2 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 MAPK10-260ENST00000641047 2546 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 CERS3-201ENST00000284382 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.41□□□□□ -1.06
SNX18Q96RF0 AC132825.3-201ENST00000562182 4710 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 MMP1-201ENST00000315274 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 AOX2P-204ENST00000487742 3284 ntBASIC8.41□□□□□ -1.06
SNX18Q96RF0 CSF2RA-209ENST00000432318 1940 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNX18Q96RF0 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNX18Q96RF0 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.4□□□□□ -1.06
SNX18Q96RF0 LNP1-203ENST00000489752 1813 ntTSL 5 BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms