Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AP000542.3-201ENST00000623391 6114 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 C11orf54-201ENST00000331239 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 CSF1R-201ENST00000286301 3989 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 DMP1-201ENST00000282479 2634 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 TMPRSS7-203ENST00000452346 2616 ntTSL 5 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 VWA5A-204ENST00000449321 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 TBC1D22A-AS1-202ENST00000640274 1951 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 OR52E4-201ENST00000316987 1027 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AZI2-202ENST00000334100 943 ntTSL 3 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 HMGN1-202ENST00000380747 709 ntTSL 3 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 KRTAP9-1-201ENST00000398470 753 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 RHBDD1-203ENST00000409053 538 ntTSL 4 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 HNRNPA1P70-201ENST00000420836 1087 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AL031289.1-201ENST00000440100 471 ntTSL 3 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 OR5BH1P-201ENST00000454101 919 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AC003666.1-201ENST00000454113 611 ntTSL 3 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 RN7SL144P-201ENST00000475761 295 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 RIIAD1-206ENST00000479191 449 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 SMIM19-205ENST00000490331 487 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AC110768.2-201ENST00000506540 329 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 GABRP-207ENST00000519598 1284 ntTSL 5 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AC116456.1-202ENST00000528151 597 ntTSL 4 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AP001767.3-201ENST00000533329 436 ntTSL 5 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 GABARAPL1-214ENST00000545047 559 ntTSL 4 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 LINC02445-201ENST00000551387 459 ntTSL 5 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 PCED1B-AS1-209ENST00000552269 673 ntTSL 2 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 FTLP14-201ENST00000562087 484 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 PMM2-213ENST00000566983 907 ntTSL 5 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 RN7SL847P-201ENST00000582819 270 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AC022400.4-201ENST00000604613 286 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AC024257.4-201ENST00000618746 458 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 SMCR2_1.1-201ENST00000621493 157 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AL356481.2-201ENST00000629902 528 ntTSL 3 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 KRTAP9-1-202ENST00000634235 351 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 LINC01132-202ENST00000641214 1085 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 ANAPC16-204ENST00000615507 3100 ntTSL 3 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 DPF3-216ENST00000614862 4221 ntTSL 5 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 FAM107B-206ENST00000378470 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AKR1C4-202ENST00000380448 1414 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 PRR15L-201ENST00000300557 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 SSBP3-AS1-201ENST00000361350 2624 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AC130365.1-201ENST00000530524 1553 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AP001120.1-201ENST00000561598 3710 ntBASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 CYP4A22-201ENST00000294337 1725 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 PDZK1-205ENST00000451928 1897 ntTSL 2 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 PABPC1P12-201ENST00000428454 2175 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 CDKN2B-AS1-203ENST00000428597 3835 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 UBAP2L-201ENST00000271877 3997 ntTSL 5 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 LCA5L-202ENST00000358268 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AL096869.3-201ENST00000567837 2626 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 MAPK1IP1L-205ENST00000622254 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 XRCC2-201ENST00000359321 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 RHPN2-201ENST00000254260 3500 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 IRF1-201ENST00000245414 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 RNA5SP452-201ENST00000363004 119 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 LRMDA-201ENST00000372499 899 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 MIR25-201ENST00000384816 84 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 Z97987.1-202ENST00000411708 391 ntTSL 3 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AC092810.3-201ENST00000416349 473 ntTSL 3 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 LINC01655-201ENST00000431729 423 ntTSL 3 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 WBP1LP6-201ENST00000438434 424 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AC092568.1-201ENST00000440950 1284 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AL592103.1-201ENST00000446321 810 ntTSL 2 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AC093582.1-201ENST00000447086 385 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 LINC02499-203ENST00000508147 455 ntTSL 3 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 SPRY4-AS1-204ENST00000510311 591 ntTSL 4 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 CSNK1A1-206ENST00000515748 620 ntTSL 2 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AC016877.2-201ENST00000522128 1069 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 TDGF1P5-201ENST00000523009 453 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 WT1-AS-206ENST00000525436 1254 ntTSL 5 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 ZNF195-220ENST00000528796 881 ntTSL 5 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 TBX5-AS1-203ENST00000531202 822 ntTSL 2 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 PROSER3-207ENST00000537459 772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AC009060.2-201ENST00000569264 106 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AC015674.1-201ENST00000578482 267 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 NDE1P2-201ENST00000605569 1105 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AC008592.5-201ENST00000607856 547 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 PACERR-201ENST00000608917 825 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AC007216.5-201ENST00000612457 109 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AC138894.4-201ENST00000616703 256 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AC138932.4-201ENST00000619102 109 ntBASIC8.42□□□□□ -1.06
NPIPA3F8WFD2 AC138969.4-201ENST00000620593 109 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms