Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 NYAP2-201ENST00000272907 4590 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 MITF-209ENST00000448226 2489 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
MTHFRP42898 AP004782.1-201ENST00000623990 3433 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 ENSA-209ENST00000369016 923 ntTSL 5 BASIC9.73□□□□□ -0.85
MTHFRP42898 AC006460.1-201ENST00000421437 808 ntTSL 5 BASIC9.73□□□□□ -0.85
MTHFRP42898 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC9.73□□□□□ -0.85
MTHFRP42898 AC136896.1-201ENST00000438334 547 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 PHKA2-AS1-201ENST00000439295 597 ntTSL 3 BASIC9.73□□□□□ -0.85
MTHFRP42898 LDHAP3-201ENST00000448312 1008 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 PRELID1P3-201ENST00000450055 643 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 PGM5P4-AS1-204ENST00000450636 537 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC9.73□□□□□ -0.85
MTHFRP42898 LINC02037-201ENST00000455821 1195 ntTSL 5 BASIC9.73□□□□□ -0.85
MTHFRP42898 RN7SL35P-201ENST00000466169 292 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 AC004918.1-201ENST00000467537 770 ntTSL 2 BASIC9.73□□□□□ -0.85
MTHFRP42898 RN7SL573P-201ENST00000485340 276 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 TUBB4BP5-201ENST00000512282 427 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 AC008840.1-201ENST00000512486 809 ntTSL 5 BASIC9.73□□□□□ -0.85
MTHFRP42898 IGHV3-36-201ENST00000520848 401 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 AC021915.1-201ENST00000522541 824 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 IGLVI-70-201ENST00000523272 390 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 AC117503.2-201ENST00000538837 321 ntTSL 3 BASIC9.73□□□□□ -0.85
MTHFRP42898 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC9.73□□□□□ -0.85
MTHFRP42898 FLT1-205ENST00000543394 1275 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 PCED1B-AS1-204ENST00000547851 780 ntTSL 3 BASIC9.73□□□□□ -0.85
MTHFRP42898 AC009139.1-201ENST00000561672 652 ntTSL 2 BASIC9.73□□□□□ -0.85
MTHFRP42898 RN7SL123P-201ENST00000577239 292 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 AC010487.2-201ENST00000594546 486 ntTSL 2 BASIC9.73□□□□□ -0.85
MTHFRP42898 BNIP3P37-201ENST00000604107 901 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 AC211469.1-201ENST00000604263 394 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 AL049829.3-202ENST00000604278 711 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 AP001425.1-202ENST00000605450 1063 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 AC055822.1-201ENST00000606067 445 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC9.73□□□□□ -0.85
MTHFRP42898 AC093726.2-201ENST00000609134 679 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 FLT1-208ENST00000617835 434 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 AL031710.2-201ENST00000621884 722 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 CSF2RA-209ENST00000432318 1940 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
MTHFRP42898 SSPN-202ENST00000422622 4348 ntTSL 2 BASIC9.73□□□□□ -0.85
MTHFRP42898 RNF212B-202ENST00000399910 1670 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
MTHFRP42898 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 LEP-201ENST00000308868 3420 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 KDM4A-201ENST00000372396 4474 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 VPS45-202ENST00000369130 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 DAB2-201ENST00000320816 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 GSDMC-204ENST00000619643 1831 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
MTHFRP42898 SLC6A16-201ENST00000335875 2938 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
MTHFRP42898 RCBTB1-202ENST00000378302 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
MTHFRP42898 ZNF267-201ENST00000300870 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 ADAM32-201ENST00000379907 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC9.72□□□□□ -0.85
MTHFRP42898 TRIM53AP-201ENST00000532014 1544 ntBASIC9.72□□□□□ -0.85
MTHFRP42898 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 PFKFB1-202ENST00000375006 1929 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 ELP3-201ENST00000256398 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 CEP95-203ENST00000556440 3139 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 EFCAB10-205ENST00000486180 1550 ntAPPRIS P5 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 AC002451.2-201ENST00000624998 2398 ntBASIC9.72□□□□□ -0.85
MTHFRP42898 LCP2-210ENST00000628092 2421 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
MTHFRP42898 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC9.72□□□□□ -0.85
MTHFRP42898 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 DBF4B-201ENST00000315005 2997 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 MAT2B-202ENST00000321757 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 MIR637-201ENST00000385000 99 ntBASIC9.72□□□□□ -0.85
MTHFRP42898 RPS12P16-201ENST00000399739 407 ntBASIC9.72□□□□□ -0.85
MTHFRP42898 RN7SKP7-201ENST00000410540 285 ntBASIC9.72□□□□□ -0.85
MTHFRP42898 ZRANB2-AS2-202ENST00000413421 826 ntTSL 3 BASIC9.72□□□□□ -0.85
MTHFRP42898 LENG8-AS1-202ENST00000429922 871 ntTSL 4 BASIC9.72□□□□□ -0.85
MTHFRP42898 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC9.72□□□□□ -0.85
MTHFRP42898 AL022313.3-201ENST00000433970 405 ntTSL 2 BASIC9.72□□□□□ -0.85
MTHFRP42898 POLR3KP1-201ENST00000449146 342 ntBASIC9.72□□□□□ -0.85
MTHFRP42898 AC016546.1-201ENST00000473590 463 ntBASIC9.72□□□□□ -0.85
MTHFRP42898 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC9.72□□□□□ -0.85
MTHFRP42898 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC9.72□□□□□ -0.85
MTHFRP42898 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC9.72□□□□□ -0.85
MTHFRP42898 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC9.72□□□□□ -0.85
MTHFRP42898 AC022034.4-201ENST00000521930 469 ntTSL 3 BASIC9.72□□□□□ -0.85
MTHFRP42898 RAET1E-205ENST00000529948 875 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 LINC01965-202ENST00000537492 552 ntTSL 4 BASIC9.72□□□□□ -0.85
MTHFRP42898 PRSS58-201ENST00000547058 913 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 AC092114.1-201ENST00000567227 532 ntTSL 4 BASIC9.72□□□□□ -0.85
MTHFRP42898 AC008649.2-201ENST00000585999 242 ntTSL 5 BASIC9.72□□□□□ -0.85
MTHFRP42898 CU633967.1-202ENST00000623449 560 ntTSL 5 BASIC9.72□□□□□ -0.85
MTHFRP42898 CU638689.5-201ENST00000623892 1032 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
MTHFRP42898 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 PRMT3-203ENST00000437750 1736 ntTSL 2 BASIC9.72□□□□□ -0.85
MTHFRP42898 GPLD1-201ENST00000230036 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 MFSD1P1-201ENST00000576210 1327 ntBASIC9.72□□□□□ -0.85
MTHFRP42898 GAPVD1-219ENST00000495955 5309 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 LRRTM4-202ENST00000409093 2247 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
MTHFRP42898 GPN1-202ENST00000407583 1395 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 HNRNPKP2-201ENST00000447355 1390 ntBASIC9.72□□□□□ -0.85
MTHFRP42898 AARS2-201ENST00000244571 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
MTHFRP42898 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms