Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC021106.2-201ENST00000505310 710 ntBASIC8.47□□□□□ -1.05
P04436 AC233724.16-201ENST00000510838 1201 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
P04436 TUBB4BP5-201ENST00000512282 427 ntBASIC8.47□□□□□ -1.05
P04436 WBP1LP2-201ENST00000515260 998 ntBASIC8.47□□□□□ -1.05
P04436 AC008591.1-202ENST00000515569 462 ntTSL 2 BASIC8.47□□□□□ -1.05
P04436 GABRP-207ENST00000519598 1284 ntTSL 5 BASIC8.47□□□□□ -1.05
P04436 LINC01024-206ENST00000522747 1044 ntTSL 3 BASIC8.47□□□□□ -1.05
P04436 CCND2P1-201ENST00000539268 799 ntBASIC8.47□□□□□ -1.05
P04436 CAPN3-219ENST00000569136 1029 ntTSL 2 BASIC8.47□□□□□ -1.05
P04436 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC8.47□□□□□ -1.05
P04436 AP005202.3-201ENST00000582033 567 ntTSL 4 BASIC8.47□□□□□ -1.05
P04436 AC008474.1-201ENST00000589127 573 ntTSL 4 BASIC8.47□□□□□ -1.05
P04436 G6PC-204ENST00000592383 987 ntTSL 2 BASIC8.47□□□□□ -1.05
P04436 AC008875.1-201ENST00000607715 811 ntBASIC8.47□□□□□ -1.05
P04436 uc_338.23-201ENST00000614169 164 ntBASIC8.47□□□□□ -1.05
P04436 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC8.47□□□□□ -1.05
P04436 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC8.47□□□□□ -1.05
P04436 CR589904.1-203ENST00000636515 318 ntBASIC8.47□□□□□ -1.05
P04436 BCO2-208ENST00000526088 1983 ntTSL 2 BASIC8.47□□□□□ -1.05
P04436 AL445309.1-201ENST00000607565 1989 ntBASIC8.47□□□□□ -1.05
P04436 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 AC009060.1-202ENST00000502126 2242 ntTSL 2 BASIC8.47□□□□□ -1.05
P04436 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 TCEANC2-203ENST00000391366 1783 ntBASIC8.47□□□□□ -1.05
P04436 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
P04436 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC8.47□□□□□ -1.05
P04436 NPIPA7-202ENST00000530217 1331 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
P04436 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
P04436 RNF141-201ENST00000265981 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 ADAM32-201ENST00000379907 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 SLC17A6-201ENST00000263160 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04436 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
P04436 EGF-206ENST00000509793 4489 ntTSL 2 BASIC8.46□□□□□ -1.05
P04436 AL359852.1-201ENST00000624609 2197 ntBASIC8.46□□□□□ -1.05
P04436 JAKMIP2-AS1-201ENST00000626945 1920 ntTSL 2 BASIC8.46□□□□□ -1.05
P04436 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
P04436 RBBP4-201ENST00000373485 1417 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04436 AL022322.1-201ENST00000609162 1433 ntBASIC8.46□□□□□ -1.05
P04436 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04436 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
P04436 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.46□□□□□ -1.05
P04436 ATP8A2-201ENST00000255283 3287 ntTSL 5 BASIC8.46□□□□□ -1.05
P04436 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04436 LRRTM2-202ENST00000518785 1958 ntTSL 2 BASIC8.46□□□□□ -1.05
P04436 RASSF4-201ENST00000340258 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04436 GRIK1-207ENST00000399914 3624 ntTSL 5 BASIC8.46□□□□□ -1.05
P04436 SPDYE10P-201ENST00000576332 2021 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
P04436 ADGRG1-255ENST00000567835 3741 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04436 LRGUK-201ENST00000285928 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04436 ZNF449-202ENST00000370761 2051 ntTSL 2 BASIC8.46□□□□□ -1.05
P04436 TRIM53AP-201ENST00000532014 1544 ntBASIC8.46□□□□□ -1.05
P04436 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
P04436 ZFY-204ENST00000449237 3464 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
P04436 CLDN18-201ENST00000183605 3520 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
P04436 CSTL1-201ENST00000246020 510 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
P04436 PTH-201ENST00000282091 813 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
P04436 OR8J3-201ENST00000301529 948 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
P04436 SAMD3-201ENST00000324172 993 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
P04436 CSTL1-202ENST00000347397 736 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
P04436 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
P04436 RPL17P10-201ENST00000416091 555 ntBASIC8.46□□□□□ -1.06
P04436 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC8.46□□□□□ -1.06
P04436 AC121158.1-201ENST00000425645 239 ntTSL 3 BASIC8.46□□□□□ -1.06
P04436 OR13D2P-201ENST00000430667 907 ntBASIC8.46□□□□□ -1.06
P04436 AL031289.1-201ENST00000440100 471 ntTSL 3 BASIC8.46□□□□□ -1.06
P04436 CRIP1P4-201ENST00000442565 229 ntBASIC8.46□□□□□ -1.06
P04436 PRDX2P4-201ENST00000447134 600 ntBASIC8.46□□□□□ -1.06
P04436 IFNA13-201ENST00000449498 634 ntAPPRIS ALT1 BASIC8.46□□□□□ -1.06
P04436 RN7SL144P-201ENST00000475761 295 ntBASIC8.46□□□□□ -1.06
P04436 AC092807.3-202ENST00000498304 508 ntTSL 3 BASIC8.46□□□□□ -1.06
P04436 LINC02499-203ENST00000508147 455 ntTSL 3 BASIC8.46□□□□□ -1.06
P04436 AC114781.2-201ENST00000515670 394 ntTSL 3 BASIC8.46□□□□□ -1.06
P04436 NDUFC2-202ENST00000525085 495 ntTSL 3 BASIC8.46□□□□□ -1.06
P04436 AC103681.1-201ENST00000531663 423 ntTSL 3 BASIC8.46□□□□□ -1.06
P04436 NDUFC2-205ENST00000534029 422 ntTSL 2 BASIC8.46□□□□□ -1.06
P04436 AC007406.2-201ENST00000540868 503 ntTSL 5 BASIC8.46□□□□□ -1.06
P04436 BRWD1P2-201ENST00000546823 340 ntBASIC8.46□□□□□ -1.06
P04436 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC8.46□□□□□ -1.06
P04436 AP007216.1-201ENST00000563932 385 ntTSL 3 BASIC8.46□□□□□ -1.06
P04436 AC003965.1-201ENST00000575693 667 ntTSL 3 BASIC8.46□□□□□ -1.06
P04436 RN7SL198P-201ENST00000583190 258 ntBASIC8.46□□□□□ -1.06
P04436 PLS3-AS1-201ENST00000606397 521 ntTSL 4 BASIC8.46□□□□□ -1.06
P04436 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC8.46□□□□□ -1.06
P04436 SMCR2_1.1-201ENST00000621493 157 ntBASIC8.46□□□□□ -1.06
P04436 ENTPD1-210ENST00000543964 1579 ntTSL 2 BASIC8.46□□□□□ -1.06
P04436 CLEC4M-205ENST00000394122 1898 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
P04436 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC8.46□□□□□ -1.06
P04436 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.46□□□□□ -1.06
P04436 C1orf27-203ENST00000419367 1900 ntTSL 2 BASIC8.46□□□□□ -1.06
P04436 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
P04436 APOL1-206ENST00000426053 2808 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
P04436 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
P04436 MX1-203ENST00000398600 3470 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
P04436 SLC39A6-201ENST00000269187 3543 ntAPPRIS P3 TSL 2 BASIC8.46□□□□□ -1.06
P04436 CASC15-203ENST00000605917 4461 ntBASIC8.46□□□□□ -1.06
P04436 C14orf159-228ENST00000523771 2976 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
P04436 GSDMB-204ENST00000394179 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
P04436 AL133355.1-201ENST00000568017 2388 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms