Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AGR2-201ENST00000401412 782 ntTSL 2 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AL353705.3-201ENST00000418694 1250 ntBASIC9.83□□□□□ -0.84
LMO3Q8TAP4 NR1I3-209ENST00000428574 1117 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 FBXO36-IT1-201ENST00000432957 582 ntTSL 3 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AL513122.2-201ENST00000437135 838 ntTSL 3 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AL358976.1-201ENST00000437555 392 ntBASIC9.83□□□□□ -0.84
LMO3Q8TAP4 NR1I3-211ENST00000442691 1114 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AC073465.3-201ENST00000448468 405 ntBASIC9.83□□□□□ -0.84
LMO3Q8TAP4 RN7SL666P-201ENST00000460953 304 ntBASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AC004918.1-201ENST00000467537 770 ntTSL 2 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AC092965.1-201ENST00000469748 490 ntBASIC9.83□□□□□ -0.84
LMO3Q8TAP4 ACOT9-207ENST00000492081 683 ntTSL 3 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 NR1I3-228ENST00000511676 1061 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 NR1I3-230ENST00000511944 620 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 NR1I3-232ENST00000512372 861 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 NR1I3-234ENST00000515621 1130 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AC100860.1-201ENST00000517606 1064 ntTSL 4 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 LINC02439-201ENST00000538783 450 ntTSL 3 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AC007406.2-201ENST00000540868 503 ntTSL 5 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AC079322.1-201ENST00000568345 1135 ntBASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AC245595.2-202ENST00000611488 1197 ntBASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AC073107.2-201ENST00000620476 238 ntBASIC9.83□□□□□ -0.84
LMO3Q8TAP4 OR4Q2-202ENST00000622436 921 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AC244517.8-201ENST00000623995 467 ntTSL 4 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AL445648.1-201ENST00000641176 886 ntBASIC9.83□□□□□ -0.84
LMO3Q8TAP4 LINC01739-204ENST00000641712 1005 ntBASIC9.83□□□□□ -0.84
LMO3Q8TAP4 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AL592158.1-201ENST00000632210 4477 ntBASIC9.83□□□□□ -0.84
LMO3Q8TAP4 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 DENND1A-204ENST00000394215 1380 ntTSL 5 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 LINC02068-201ENST00000418839 3212 ntTSL 2 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AC013391.3-201ENST00000567484 1456 ntBASIC9.83□□□□□ -0.84
LMO3Q8TAP4 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 ABCC11-202ENST00000356608 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 KCNA2-215ENST00000640956 1584 ntTSL 5 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 KIAA0100-202ENST00000528896 7407 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 SEMA4D-202ENST00000356444 4503 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
LMO3Q8TAP4 SCMH1-202ENST00000337495 3108 ntTSL 2 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 SLC16A7-214ENST00000552024 1815 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 ZNF565-203ENST00000392173 1931 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AC008870.1-201ENST00000566996 3009 ntTSL 2 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 TSPAN31-206ENST00000547992 3434 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 WISP3-201ENST00000230529 1235 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 OR56B4-201ENST00000316529 1152 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 WTAPP1-201ENST00000371455 546 ntTSL 4 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 GHRH-203ENST00000373614 570 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AC009967.1-201ENST00000379462 793 ntBASIC9.82□□□□□ -0.84
LMO3Q8TAP4 SNORA48-201ENST00000386847 135 ntBASIC9.82□□□□□ -0.84
LMO3Q8TAP4 PPM1N-202ENST00000396736 527 ntTSL 5 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 ZFY-AS1-201ENST00000417305 500 ntTSL 2 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AP001062.2-201ENST00000426029 127 ntTSL 3 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 CDC42-IT1-201ENST00000431803 692 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AC009078.1-201ENST00000474978 783 ntBASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AC100771.1-201ENST00000496450 279 ntBASIC9.82□□□□□ -0.84
LMO3Q8TAP4 MICE-207ENST00000510438 1157 ntBASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AP002360.1-204ENST00000529331 700 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 ASB9P1-201ENST00000557146 793 ntBASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AC023034.2-201ENST00000559428 476 ntTSL 3 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AC092634.5-207ENST00000596569 805 ntTSL 5 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AC119751.8-201ENST00000597032 156 ntBASIC9.82□□□□□ -0.84
LMO3Q8TAP4 DSTNP2-202ENST00000602547 1105 ntBASIC9.82□□□□□ -0.84
LMO3Q8TAP4 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AC247036.7-201ENST00000639643 304 ntBASIC9.82□□□□□ -0.84
LMO3Q8TAP4 LINC01132-202ENST00000641214 1085 ntBASIC9.82□□□□□ -0.84
LMO3Q8TAP4 TEX2-201ENST00000258991 5232 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 MAPK10-232ENST00000515400 2076 ntTSL 5 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 EIF4G3-202ENST00000356916 2179 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 MAGEE2-201ENST00000373359 2249 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 KANK1-210ENST00000619269 5688 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 EIF4BP6-201ENST00000431936 1828 ntBASIC9.82□□□□□ -0.84
LMO3Q8TAP4 LINC02254-201ENST00000558621 1726 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 LINC02525-202ENST00000435043 1505 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AC133561.2-202ENST00000561642 1301 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LMO3Q8TAP4 AC007228.2-201ENST00000602145 1328 ntBASIC9.82□□□□□ -0.84
LMO3Q8TAP4 DIS3L-201ENST00000319194 3763 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LMO3Q8TAP4 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LMO3Q8TAP4 PTPN20-201ENST00000374218 2872 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
LMO3Q8TAP4 AMPD3-208ENST00000528723 2753 ntTSL 2 BASIC9.81□□□□□ -0.84
LMO3Q8TAP4 FCRL1-203ENST00000368176 2596 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LMO3Q8TAP4 MINDY3-201ENST00000277632 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LMO3Q8TAP4 CD302-202ENST00000429078 3803 ntTSL 2 BASIC9.81□□□□□ -0.84
LMO3Q8TAP4 CELF1-205ENST00000395292 2191 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
LMO3Q8TAP4 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LMO3Q8TAP4 CACNB2-216ENST00000617363 4385 ntTSL 5 BASIC9.81□□□□□ -0.84
LMO3Q8TAP4 NUP210L-203ENST00000368559 5889 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
LMO3Q8TAP4 USP17L8-201ENST00000527080 1593 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
LMO3Q8TAP4 LINC00598-213ENST00000637438 1456 ntTSL 5 BASIC9.81□□□□□ -0.84
LMO3Q8TAP4 ZMYND8-202ENST00000311275 5362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms