Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 DAZ3-203ENST00000446723 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 DAZ2-209ENST00000449947 3372 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 TTC1-201ENST00000231238 1467 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 CASP1-202ENST00000436863 1477 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 PDE4DIPP1-201ENST00000420737 1641 ntBASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 DYNC1I1-206ENST00000457059 2393 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC9.78□□□□□ -0.84
SYCE2Q6PIF2 SLC35A4-202ENST00000514199 3617 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
SYCE2Q6PIF2 ST5-213ENST00000526757 3019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
SYCE2Q6PIF2 GUCY1A3-208ENST00000511507 2552 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SYCE2Q6PIF2 AC105105.1-201ENST00000591360 2553 ntTSL 2 BASIC9.77□□□□□ -0.84
SYCE2Q6PIF2 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SYCE2Q6PIF2 LINC02112-201ENST00000511616 1847 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SYCE2Q6PIF2 AC012158.1-203ENST00000488306 1352 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SYCE2Q6PIF2 DDX46-202ENST00000452510 5689 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SYCE2Q6PIF2 PLCD4-203ENST00000432688 3225 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
SYCE2Q6PIF2 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC9.77□□□□□ -0.84
SYCE2Q6PIF2 LCLAT1-202ENST00000319406 2774 ntTSL 2 BASIC9.77□□□□□ -0.84
SYCE2Q6PIF2 LAMB4-203ENST00000418464 2600 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 PCDHA10-203ENST00000562220 12358 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 RTTN-202ENST00000578780 2333 ntTSL 5 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AFAP1-202ENST00000360265 7479 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 SCMH1-201ENST00000326197 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AC004877.1-201ENST00000608963 4093 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 TGFB3-201ENST00000238682 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AC073508.2-201ENST00000476049 2502 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 OR51I2-201ENST00000341449 1070 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 OR6B1-201ENST00000408922 1055 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 RPL4P5-201ENST00000413888 1276 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 OR13D2P-201ENST00000430667 907 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 LINC02037-201ENST00000455821 1195 ntTSL 5 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 KLF7P1-201ENST00000490941 1048 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 RN7SL62P-201ENST00000498506 297 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AC010457.1-202ENST00000510137 337 ntTSL 2 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AC021915.1-201ENST00000522541 824 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 OR4A50P-201ENST00000526321 908 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AC026369.3-201ENST00000540226 586 ntTSL 2 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AC009120.2-202ENST00000566411 679 ntTSL 3 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 FXYD5-211ENST00000590686 862 ntAPPRIS P2 TSL 3 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AL049829.3-202ENST00000604278 711 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AC055822.1-201ENST00000606067 445 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AC023302.1-201ENST00000607458 492 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 PCDH18-206ENST00000611581 819 ntTSL 4 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 MIR6892-201ENST00000612346 115 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 MIR6083-201ENST00000612737 106 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AL591926.6-201ENST00000617375 415 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AL355987.5-201ENST00000621585 411 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 Z98043.1-201ENST00000624123 339 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 IPO5P1-201ENST00000593576 2887 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AP002008.3-201ENST00000528614 2587 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 RASGRP4-217ENST00000615439 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 MUSK-201ENST00000189978 2408 ntTSL 5 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 MUSK-204ENST00000374440 2408 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 CPSF1P1-201ENST00000397477 3730 ntBASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 AC026358.1-201ENST00000539391 2256 ntTSL 3 BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 RUNX1T1-215ENST00000518844 2453 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 STX16-203ENST00000358029 4329 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 ABI1-205ENST00000376139 3516 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SYCE2Q6PIF2 SULF2-206ENST00000467815 3905 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 ARL6-202ENST00000394206 1590 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 AL135903.1-201ENST00000402742 1590 ntBASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 AC092645.1-201ENST00000624058 2272 ntBASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 MPHOSPH8-201ENST00000361479 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 SP1-201ENST00000327443 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 MMS19-202ENST00000355839 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 CLUL1-203ENST00000540035 2199 ntTSL 2 BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 GNG8-201ENST00000300873 216 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 FAM104B-201ENST00000332132 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 ZC3H7A-201ENST00000355758 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 OSTCP6-201ENST00000407493 457 ntBASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 AL353604.1-201ENST00000413901 596 ntTSL 3 BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 AC004448.4-209ENST00000421796 684 ntTSL 5 BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 AC121158.1-201ENST00000425645 239 ntTSL 3 BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 BLNK-204ENST00000427367 1284 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 AL035420.2-201ENST00000433587 616 ntTSL 3 BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 AL354761.1-201ENST00000434190 526 ntBASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 OR51R1P-201ENST00000435309 952 ntBASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 RPE-207ENST00000435437 858 ntTSL 2 BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 CASP12-205ENST00000441710 1168 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 AC007237.1-201ENST00000442074 499 ntBASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 RN7SL573P-201ENST00000485340 276 ntBASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 LINC01322-203ENST00000496693 1075 ntTSL 5 BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 LRTOMT-216ENST00000539271 570 ntTSL 4 BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 BANF2-205ENST00000545418 360 ntTSL 3 BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 PRSS58-201ENST00000547058 913 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 AL442663.4-201ENST00000555304 289 ntBASIC9.76□□□□□ -0.85
SYCE2Q6PIF2 ULK4P3-201ENST00000563895 440 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms