Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TDGF1-201ENST00000296145 2513 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 ZNF80-202ENST00000482457 2471 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
SLC1A1P43005 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 RND3-203ENST00000409557 2372 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC9.68□□□□□ -0.86
SLC1A1P43005 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 MAPK10-232ENST00000515400 2076 ntTSL 5 BASIC9.68□□□□□ -0.86
SLC1A1P43005 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 AC009102.1-201ENST00000564074 1777 ntTSL 2 BASIC9.68□□□□□ -0.86
SLC1A1P43005 PRR27-201ENST00000344526 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC9.68□□□□□ -0.86
SLC1A1P43005 STXBP5L-208ENST00000497029 3036 ntTSL 5 BASIC9.68□□□□□ -0.86
SLC1A1P43005 CCNB1IP1-202ENST00000358932 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 SP100-202ENST00000340126 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 MAK-201ENST00000313243 3984 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
SLC1A1P43005 DCTN2-202ENST00000543672 1321 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
SLC1A1P43005 AC007228.2-201ENST00000602145 1328 ntBASIC9.68□□□□□ -0.86
SLC1A1P43005 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 C20orf173-201ENST00000246199 1034 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
SLC1A1P43005 TMEM126A-201ENST00000304511 739 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 OR51G2-201ENST00000322013 1023 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
SLC1A1P43005 TCEANC2-202ENST00000371331 936 ntTSL 2 BASIC9.68□□□□□ -0.86
SLC1A1P43005 MIR296-201ENST00000385215 80 ntBASIC9.68□□□□□ -0.86
SLC1A1P43005 AC073263.1-202ENST00000401851 924 ntBASIC9.68□□□□□ -0.86
SLC1A1P43005 AL139246.3-201ENST00000424215 626 ntTSL 5 BASIC9.68□□□□□ -0.86
SLC1A1P43005 AC099568.1-201ENST00000432395 509 ntTSL 3 BASIC9.68□□□□□ -0.86
SLC1A1P43005 DNM1P24-201ENST00000441091 490 ntBASIC9.68□□□□□ -0.86
SLC1A1P43005 C20orf173-204ENST00000444723 1059 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
SLC1A1P43005 DLEU1-206ENST00000463474 1048 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 RN7SL400P-201ENST00000473634 296 ntBASIC9.68□□□□□ -0.86
SLC1A1P43005 DLEU1-220ENST00000478860 602 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 RN7SL584P-201ENST00000492309 297 ntBASIC9.68□□□□□ -0.86
SLC1A1P43005 NUP210P3-201ENST00000506964 388 ntBASIC9.68□□□□□ -0.86
SLC1A1P43005 GABRP-207ENST00000519598 1284 ntTSL 5 BASIC9.68□□□□□ -0.86
SLC1A1P43005 AC124276.2-201ENST00000527997 550 ntTSL 3 BASIC9.68□□□□□ -0.86
SLC1A1P43005 AC025576.2-201ENST00000535806 390 ntTSL 3 BASIC9.68□□□□□ -0.86
SLC1A1P43005 TUBB4BP1-201ENST00000545422 178 ntBASIC9.68□□□□□ -0.86
SLC1A1P43005 AC007494.2-201ENST00000563757 764 ntTSL 3 BASIC9.68□□□□□ -0.86
SLC1A1P43005 AC104758.5-201ENST00000569892 571 ntTSL 3 BASIC9.68□□□□□ -0.86
SLC1A1P43005 AC104564.4-201ENST00000579050 465 ntTSL 2 BASIC9.68□□□□□ -0.86
SLC1A1P43005 AL161725.1-212ENST00000585819 745 ntTSL 5 BASIC9.68□□□□□ -0.86
SLC1A1P43005 MIR6127-201ENST00000614019 109 ntBASIC9.68□□□□□ -0.86
SLC1A1P43005 AL513327.1-208ENST00000624012 1047 ntTSL 5 BASIC9.68□□□□□ -0.86
SLC1A1P43005 MAPK10-312ENST00000641391 2488 ntAPPRIS P2 BASIC9.68□□□□□ -0.86
SLC1A1P43005 MAPK10-378ENST00000642009 2463 ntAPPRIS P2 BASIC9.68□□□□□ -0.86
SLC1A1P43005 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 AL354732.1-201ENST00000416416 2080 ntTSL 5 BASIC9.68□□□□□ -0.86
SLC1A1P43005 LINC01929-201ENST00000589125 3067 ntTSL 2 BASIC9.68□□□□□ -0.86
SLC1A1P43005 AC109347.1-201ENST00000562919 2036 ntBASIC9.68□□□□□ -0.86
SLC1A1P43005 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 SIMC1-201ENST00000332772 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 CD59-203ENST00000415002 1878 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 CYP4A22-201ENST00000294337 1725 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
SLC1A1P43005 EFHC1-213ENST00000635996 2548 ntTSL 5 BASIC9.67□□□□□ -0.86
SLC1A1P43005 TTC26-210ENST00000495038 1599 ntTSL 2 BASIC9.67□□□□□ -0.86
SLC1A1P43005 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
SLC1A1P43005 AC008870.1-201ENST00000566996 3009 ntTSL 2 BASIC9.67□□□□□ -0.86
SLC1A1P43005 ANKRD20A11P-206ENST00000451663 3717 ntBASIC9.67□□□□□ -0.86
SLC1A1P43005 SCMH1-203ENST00000361191 2906 ntTSL 5 BASIC9.67□□□□□ -0.86
SLC1A1P43005 LINC02245-201ENST00000449259 2928 ntTSL 5 BASIC9.67□□□□□ -0.86
SLC1A1P43005 GFM2-202ENST00000345239 2856 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SLC1A1P43005 APOL1-206ENST00000426053 2808 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
SLC1A1P43005 LINC00943-203ENST00000535544 2815 ntTSL 2 BASIC9.67□□□□□ -0.86
SLC1A1P43005 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SLC1A1P43005 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC9.67□□□□□ -0.86
SLC1A1P43005 HNRNPKP2-201ENST00000447355 1390 ntBASIC9.67□□□□□ -0.86
SLC1A1P43005 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SLC1A1P43005 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SLC1A1P43005 TAAR2-201ENST00000275191 1157 ntAPPRIS P3 BASIC9.67□□□□□ -0.86
SLC1A1P43005 DEFA3-201ENST00000327857 498 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SLC1A1P43005 OR13C8-201ENST00000335040 963 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
SLC1A1P43005 Z73361.1-201ENST00000423690 612 ntBASIC9.67□□□□□ -0.86
SLC1A1P43005 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SLC1A1P43005 LINC00674-201ENST00000435469 678 ntTSL 3 BASIC9.67□□□□□ -0.86
SLC1A1P43005 ADGRF5P1-201ENST00000435875 1135 ntBASIC9.67□□□□□ -0.86
SLC1A1P43005 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC9.67□□□□□ -0.86
SLC1A1P43005 COX5BP6-201ENST00000454311 211 ntBASIC9.67□□□□□ -0.86
SLC1A1P43005 AC048341.1-201ENST00000480482 403 ntBASIC9.67□□□□□ -0.86
SLC1A1P43005 RN7SL845P-201ENST00000484385 290 ntBASIC9.67□□□□□ -0.86
SLC1A1P43005 RN7SL632P-201ENST00000489734 266 ntBASIC9.67□□□□□ -0.86
SLC1A1P43005 AC008525.1-201ENST00000508719 676 ntTSL 3 BASIC9.67□□□□□ -0.86
SLC1A1P43005 AC087664.3-201ENST00000524110 328 ntBASIC9.67□□□□□ -0.86
SLC1A1P43005 ST13P10-201ENST00000526466 1082 ntBASIC9.67□□□□□ -0.86
SLC1A1P43005 NFRKB-205ENST00000526940 539 ntTSL 2 BASIC9.67□□□□□ -0.86
SLC1A1P43005 AP001767.3-201ENST00000533329 436 ntTSL 5 BASIC9.67□□□□□ -0.86
SLC1A1P43005 RRP8-205ENST00000534343 726 ntTSL 2 BASIC9.67□□□□□ -0.86
SLC1A1P43005 FCF1-202ENST00000534938 794 ntTSL 3 BASIC9.67□□□□□ -0.86
SLC1A1P43005 VAMP1-204ENST00000535180 747 ntTSL 3 BASIC9.67□□□□□ -0.86
SLC1A1P43005 AC008770.2-201ENST00000547473 542 ntAPPRIS P1 TSL 4 BASIC9.67□□□□□ -0.86
SLC1A1P43005 AC084033.3-201ENST00000551421 451 ntTSL 2 BASIC9.67□□□□□ -0.86
SLC1A1P43005 LRP1-AS-202ENST00000555461 645 ntTSL 2 BASIC9.67□□□□□ -0.86
SLC1A1P43005 AC009108.2-201ENST00000566485 269 ntTSL 5 BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms