Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 AC006970.2-201ENST00000450065 779 ntBASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 AC005181.1-201ENST00000604782 1256 ntBASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 RNF165-205ENST00000588679 2904 ntBASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 AC092667.1-201ENST00000434301 2586 ntBASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 MIR663A-201ENST00000385250 93 ntBASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 AC068338.2-201ENST00000563278 1430 ntBASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 CROCCP5-201ENST00000436658 830 ntBASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 CDV3P1-201ENST00000471403 739 ntBASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 AC008694.1-202ENST00000636953 945 ntBASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 AC091799.1-201ENST00000422823 811 ntBASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 AL162412.1-201ENST00000567129 965 ntBASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms