Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 AC006970.2-201ENST00000450065 779 ntBASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 AC005181.1-201ENST00000604782 1256 ntBASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 RNF165-205ENST00000588679 2904 ntBASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCA3PQ9Y6N3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 AC092667.1-201ENST00000434301 2586 ntBASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCA3PQ9Y6N3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 MIR663A-201ENST00000385250 93 ntBASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLCA3PQ9Y6N3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 AC068338.2-201ENST00000563278 1430 ntBASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 CROCCP5-201ENST00000436658 830 ntBASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 CDV3P1-201ENST00000471403 739 ntBASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 AC008694.1-202ENST00000636953 945 ntBASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLCA3PQ9Y6N3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 AC091799.1-201ENST00000422823 811 ntBASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 AL162412.1-201ENST00000567129 965 ntBASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLCA3PQ9Y6N3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms