Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 MIPEPP3-201ENST00000412105 444 ntBASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 PGM5P4-201ENST00000421970 445 ntBASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 AC073210.2-201ENST00000430369 194 ntBASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 CYP21A1P-202ENST00000354927 1481 ntBASIC20.17■□□□□ 0.82
DNMT3AQ9Y6K1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 KRT18P68-201ENST00000392293 1000 ntBASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 MIR4758-201ENST00000577688 71 ntBASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
DNMT3AQ9Y6K1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3AQ9Y6K1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
DNMT3AQ9Y6K1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DNMT3AQ9Y6K1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DNMT3AQ9Y6K1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 AC027702.1-201ENST00000563810 1770 ntBASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 AC092118.2-201ENST00000613495 667 ntBASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 AC133041.1-202ENST00000642053 222 ntBASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3AQ9Y6K1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 AC087633.2-202ENST00000565166 1439 ntBASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 BX276092.2-201ENST00000417668 665 ntBASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms