Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 AC087633.2-202ENST00000565166 1439 ntBASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 AC010331.1-201ENST00000611423 582 ntBASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 AC120498.8-201ENST00000614275 531 ntBASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 AL049637.2-201ENST00000641778 930 ntBASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.66■■□□□ 1.06
HCFC2Q9Y5Z7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.65■■□□□ 1.06
HCFC2Q9Y5Z7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HCFC2Q9Y5Z7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.65■■□□□ 1.06
HCFC2Q9Y5Z7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.65■■□□□ 1.06
HCFC2Q9Y5Z7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.65■■□□□ 1.06
HCFC2Q9Y5Z7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.65■■□□□ 1.06
HCFC2Q9Y5Z7 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.65■■□□□ 1.06
HCFC2Q9Y5Z7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.65■■□□□ 1.06
HCFC2Q9Y5Z7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.65■■□□□ 1.06
HCFC2Q9Y5Z7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HCFC2Q9Y5Z7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HCFC2Q9Y5Z7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HCFC2Q9Y5Z7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.64■■□□□ 1.06
HCFC2Q9Y5Z7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.64■■□□□ 1.06
HCFC2Q9Y5Z7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 KRT18P21-201ENST00000515767 1272 ntBASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
HCFC2Q9Y5Z7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 AC005829.2-201ENST00000571422 1056 ntBASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 AP001412.1-201ENST00000608405 714 ntBASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 AC006557.6-201ENST00000623071 864 ntBASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HCFC2Q9Y5Z7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 AC110285.5-201ENST00000611501 352 ntBASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.62■■□□□ 1.05
HCFC2Q9Y5Z7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 KRASP1-201ENST00000407852 552 ntBASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HCFC2Q9Y5Z7 AL135905.2-201ENST00000584934 1404 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms