Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX11Q9Y5W9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 AC007322.3-201ENST00000426526 701 ntBASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 RPPH1-201ENST00000516869 333 ntBASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 C1QBPP2-201ENST00000528754 825 ntBASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 FAM197Y4-202ENST00000622692 608 ntBASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX11Q9Y5W9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNX11Q9Y5W9 FBXW4P1-201ENST00000426721 2239 ntBASIC20.39■□□□□ 0.86
SNX11Q9Y5W9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.39■□□□□ 0.86
SNX11Q9Y5W9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SNX11Q9Y5W9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX11Q9Y5W9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.39■□□□□ 0.85
SNX11Q9Y5W9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNX11Q9Y5W9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX11Q9Y5W9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX11Q9Y5W9 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.39■□□□□ 0.85
SNX11Q9Y5W9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNX11Q9Y5W9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.39■□□□□ 0.85
SNX11Q9Y5W9 KRT17P3-201ENST00000420566 1262 ntBASIC20.39■□□□□ 0.85
SNX11Q9Y5W9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.39■□□□□ 0.85
SNX11Q9Y5W9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX11Q9Y5W9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX11Q9Y5W9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.39■□□□□ 0.85
SNX11Q9Y5W9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SNX11Q9Y5W9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX11Q9Y5W9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms