Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA6Q9Y5G7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PCDHGA6Q9Y5G7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHGA6Q9Y5G7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PCDHGA6Q9Y5G7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 RBM17P2-201ENST00000616397 1405 ntBASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 AL591742.1-201ENST00000604433 565 ntBASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 AC016405.3-201ENST00000607710 860 ntBASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA6Q9Y5G7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 POU5F1P3-201ENST00000428824 1078 ntBASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA6Q9Y5G7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHGA6Q9Y5G7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA6Q9Y5G7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA6Q9Y5G7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA6Q9Y5G7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGA6Q9Y5G7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHGA6Q9Y5G7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGA6Q9Y5G7 ITM2C-210ENST00000620962 501 ntBASIC19.75■□□□□ 0.75
PCDHGA6Q9Y5G7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGA6Q9Y5G7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA6Q9Y5G7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA6Q9Y5G7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGA6Q9Y5G7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA6Q9Y5G7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA6Q9Y5G7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA6Q9Y5G7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA6Q9Y5G7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA6Q9Y5G7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGA6Q9Y5G7 BX276092.2-201ENST00000417668 665 ntBASIC19.74■□□□□ 0.75
PCDHGA6Q9Y5G7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA6Q9Y5G7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHGA6Q9Y5G7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGA6Q9Y5G7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.74■□□□□ 0.75
PCDHGA6Q9Y5G7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms