Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 HLA-B-256ENST00000639848 1089 ntBASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CTDP1Q9Y5B0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 AC128676.1-201ENST00000454392 318 ntBASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CTDP1Q9Y5B0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 AC093827.2-201ENST00000512654 315 ntBASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 AC092368.3-202ENST00000574180 1591 ntBASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTDP1Q9Y5B0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTDP1Q9Y5B0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CTDP1Q9Y5B0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CTDP1Q9Y5B0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CTDP1Q9Y5B0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTDP1Q9Y5B0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CTDP1Q9Y5B0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.76■■□□□ 1.39
CTDP1Q9Y5B0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTDP1Q9Y5B0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CTDP1Q9Y5B0 AC105020.6-201ENST00000621523 1217 ntBASIC23.76■■□□□ 1.39
CTDP1Q9Y5B0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CTDP1Q9Y5B0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 AL158047.1-201ENST00000445918 881 ntBASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CTDP1Q9Y5B0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 PGM5P4-201ENST00000421970 445 ntBASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 PNMA6B-201ENST00000538162 1200 ntBASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 AC142381.4-202ENST00000563973 229 ntBASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms